Implementing particle swarm optimization algorithm to estimate the mixture of two Weibull parameters with censored data

We present the maximum likelihood estimation (MLE) via particle swarm optimization (PSO) algorithm to estimate the mixture of two Weibull parameters with complete and multiple censored data. A simulation study is conducted to assess the performance of the MLE via PSO algorithm, quasi-Newton method and expectation-maximization (EM) algorithm for different parameter settings and sample sizes in both uncensored and censored cases. The simulation results showed that the PSO algorithm outperforms the quasi-Newton method and the EM algorithm in most cases regarding bias and root mean square errors. Two numerical examples are used to demonstrate the performance of our proposed method.     

Inference for Log-Gamma Distribution Based on Progressively Type-II Censored Data

We discuss the maximum likelihood estimates (MLEs) of the parameters of the log-gamma distribution based on progressively Type-II censored samples. We use the profile likelihood approach to tackle the problem of the estimation of the shape parameter κ. We derive approximate maximum likelihood estimators of the parameters μ and σ and use them as initial values in the determination of the MLEs through the Newton–Raphson method. Next, we discuss the EM algorithm and propose a modified EM algorithm for the determination of the MLEs. A simulation study is conducted to evaluate the bias and mean square error of these estimators and examine their behavior as the progressive censoring scheme and the shape parameter vary. We also discuss the interval estimation of the parameters μ and σ and show that the intervals based on the asymptotic normality of MLEs have very poor probability coverages for small values of m. Finally, we present two examples to illustrate all the methods of inference discussed in this paper.     

Inference based on progressive Type I interval censored data from log-normal distribution

This article considers inference for the log-normal distribution based on progressive Type I interval censored data by both frequentist and Bayesian methods. First, the maximum likelihood estimates (MLEs) of the unknown model parameters are computed by expectation-maximization (EM) algorithm. The asymptotic standard errors (ASEs) of the MLEs are obtained by applying the missing information principle. Next, the Bayes’ estimates of the model parameters are obtained by Gibbs sampling method under both symmetric and asymmetric loss functions. The Gibbs sampling scheme is facilitated by adopting a similar data augmentation scheme as in EM algorithm. The performance of the MLEs and various Bayesian point estimates is judged via a simulation study. A real dataset is analyzed for the purpose of illustration.     

Recovering extra-binomial variation

A hierarchical logit-normal model for analysis of binary data with extra-binomial variation is examined. A method of approximate maximum likelihood estimation of the parameters is proposed. The method uses the EM algorithm and approximations to facilitate its implementation are derived. Approximate standard errors of the estimates are provided and a numerical example is used to illustrate the method.     

A robust multivariate Birnbaum–Saunders distribution: EM estimation

We propose here a robust multivariate extension of the bivariate Birnbaum–Saunders (BS) distribution derived by Kundu et al. [Bivariate Birnbaum–Saunders distribution and associated inference. J Multivariate Anal. 2010;101:113–125], based on scale mixtures of normal (SMN) distributions that are used for modelling symmetric data. This resulting multivariate BS-type distribution is an absolutely continuous distribution whose marginal and conditional distributions are of BS-type distribution of Balakrishnan et al. [Estimation in the Birnbaum–Saunders distribution based on scalemixture of normals and the EM algorithm. Stat Oper Res Trans. 2009;33:171–192]. Due to the complexity of the likelihood function, parameter estimation by direct maximization is very difficult to achieve. For this reason, we exploit the nice hierarchical representation of the proposed distribution to propose a fast and accurate EM algorithm for computing the maximum likelihood (ML) estimates of the model parameters. We then evaluate the finite-sample performance of the developed EM algorithm and the asymptotic properties of the ML estimates through empirical experiments. Finally, we illustrate the obtained results with a real data and display the robustness feature of the estimation procedure developed here.     

Likelihood inference for lognormal data with left truncation and right censoring with an illustration

The lognormal distribution is quite commonly used as a lifetime distribution. Data arising from life-testing and reliability studies are often left truncated and right censored. Here, the EM algorithm is used to estimate the parameters of the lognormal model based on left truncated and right censored data. The maximization step of the algorithm is carried out by two alternative methods, with one involving approximation using Taylor series expansion (leading to approximate maximum likelihood estimate) and the other based on the EM gradient algorithm (Lange, 1995). These two methods are compared based on Monte Carlo simulations. The Fisher scoring method for obtaining the maximum likelihood estimates shows a problem of convergence under this setup, except when the truncation percentage is small. The asymptotic variance-covariance matrix of the MLEs is derived by using the missing information principle (Louis, 1982), and then the asymptotic confidence intervals for scale and shape parameters are obtained and compared with corresponding bootstrap confidence intervals. Finally, some numerical examples are given to illustrate all the methods of inference developed here.     

Estimation of parameters in incomplete data models defined by dynamical systems

Parametric incomplete data models defined by ordinary differential equations (ODEs) are widely used in biostatistics to describe biological processes accurately. Their parameters are estimated on approximate models, whose regression functions are evaluated by a numerical integration method. Accurate and efficient estimations of these parameters are critical issues. This paper proposes parameter estimation methods involving either a stochastic approximation EM algorithm (SAEM) in the maximum likelihood estimation, or a Gibbs sampler in the Bayesian approach. Both algorithms involve the simulation of non-observed data with conditional distributions using Hastings–Metropolis (H–M) algorithms. A modified H–M algorithm, including an original local linearization scheme to solve the ODEs, is proposed to reduce the computational time significantly. The convergence on the approximate model of all these algorithms is proved. The errors induced by the numerical solving method on the conditional distribution, the likelihood and the posterior distribution are bounded. The Bayesian and maximum likelihood estimation methods are illustrated on a simulated pharmacokinetic nonlinear mixed-effects model defined by an ODE. Simulation results illustrate the ability of these algorithms to provide accurate estimates.     

A general maximum likelihood analysis of overdispersion in generalized linear models

This paper presents an EM algorithm for maximum likelihood estimation in generalized linear models with overdispersion. The algorithm is initially derived as a form of Gaussian quadrature assuming a normal mixing distribution, but with only slight variation it can be used for a completely unknown mixing distribution, giving a straightforward method for the fully non-parametric ML estimation of this distribution. This is of value because the ML estimates of the GLM parameters may be sensitive to the specification of a parametric form for the mixing distribution. A listing of a GLIM4 algorithm for fitting the overdispersed binomial logit model is given in an appendix.A simple method is given for obtaining correct standard errors for parameter estimates when using the EM algorithm.Several examples are discussed.     

Maximum Likelihood Inference for Multivariate Frailty Models Using an Automated Monte Carlo EM Algorithm

We present a maximum likelihood estimation procedure for the multivariate frailty model. The estimation is based on a Monte Carlo EM algorithm. The expectation step is approximated by averaging over random samples drawn from the posterior distribution of the frailties using rejection sampling. The maximization step reduces to a standard partial likelihood maximization. We also propose a simple rule based on the relative change in the parameter estimates to decide on sample size in each iteration and a stopping time for the algorithm. An important new concept is acquiring absolute convergence of the algorithm through sample size determination and an efficient sampling technique. The method is illustrated using a rat carcinogenesis dataset and data on vase lifetimes of cut roses. The estimation results are compared with approximate inference based on penalized partial likelihood using these two examples. Unlike the penalized partial likelihood estimation, the proposed full maximum likelihood estimation method accounts for all the uncertainty while estimating standard errors for the parameters.     

The competing risks analysis for parallel and series systems using Type-II progressive censoring

Abstract

Recently, the study of the lifetime of systems in reliability and survival analysis in the presence of several causes of failure (competing risks) has attracted attention in the literature. In this paper, series and parallel systems with exponential lifetime for each item of the system are considered. Several causes of failure independently affect lifetime distributions and observations of failure times of the systems are considered under progressive Type-II censored scheme. For series systems, the maximum likelihood estimates of parameters are computed and confidence intervals for parameters of the model are obtained using Fisher information matrix. For parallel systems, the generalized EM algorithm which uses the Newton-Raphson algorithm inside the EM algorithm is used to compute the maximum likelihood estimates of parameters. Also, the standard errors of the maximum likelihood estimates are computed by using the supplemented EM algorithm. The simulation study confirms the good performance of the introduced approach.     

Likelihood-Based Inference in Autoregressive Models with Scaled t-Distributed Innovations by Means of EM-Based Algorithms

This article applies the EM-based (ECM and ECME) algorithms to find the maximum likelihood estimates of model parameters in general AR models with independent scaled t-distributed innovations whenever the degrees of freedom are unknown. The ECME, sharing advantages with both EM and Newton–Raphson algorithms, is an extension of ECM, which itself is an extension of the EM algorithm. The ECM and ECME algorithms, which are analytically quite simple to use, are then compared based on the computational running time and the accuracy of estimation via a simulation study. The results demonstrate that the ECME is efficient and usable in practice. We also show how our method can be applied to the Wolfer's sunspot data.     

A new compounding life distribution: the Weibull–Poisson distribution

In this paper, a new compounding distribution, named the Weibull–Poisson distribution is introduced. The shape of failure rate function of the new compounding distribution is flexible, it can be decreasing, increasing, upside-down bathtub-shaped or unimodal. A comprehensive mathematical treatment of the proposed distribution and expressions of its density, cumulative distribution function, survival function, failure rate function, the kth raw moment and quantiles are provided. Maximum likelihood method using EM algorithm is developed for parameter estimation. Asymptotic properties of the maximum likelihood estimates are discussed, and intensive simulation studies are conducted for evaluating the performance of parameter estimation. The use of the proposed distribution is illustrated with examples.     

Fitting mixtures of linear regressions

In most applications, the parameters of a mixture of linear regression models are estimated by maximum likelihood using the expectation maximization (EM) algorithm. In this article, we propose the comparison of three algorithms to compute maximum likelihood estimates of the parameters of these models: the EM algorithm, the classification EM algorithm and the stochastic EM algorithm. The comparison of the three procedures was done through a simulation study of the performance (computational effort, statistical properties of estimators and goodness of fit) of these approaches on simulated data sets.

Simulation results show that the choice of the approach depends essentially on the configuration of the true regression lines and the initialization of the algorithms.     

Using BBPSO Algorithm to Estimate the Weibull Parameters with Censored Data

This article proposes the maximum likelihood estimates based on bare bones particle swarm optimization (BBPSO) algorithm for estimating the parameters of Weibull distribution with censored data, which is widely used in lifetime data analysis. This approach can produce more accuracy of the parameter estimation for the Weibull distribution. Additionally, the confidence intervals for the estimators are obtained. The simulation results show that the BB PSO algorithm outperforms the Newton–Raphson method in most cases in terms of bias, root mean square of errors, and coverage rate. Two examples are used to demonstrate the performance of the proposed approach. The results show that the maximum likelihood estimates via BBPSO algorithm perform well for estimating the Weibull parameters with censored data.     

Editorial collaborators

A simulation study of the binomial-logit model with correlated random effects is carried out based on the generalized linear mixed model (GLMM) methodology. Simulated data with various numbers of regression parameters and different values of the variance component are considered. The performance of approximate maximum likelihood (ML) and residual maximum likelihood (REML) estimators is evaluated. For a range of true parameter values, we report the average biases of estimators, the standard error of the average bias and the standard error of estimates over the simulations. In general, in terms of bias, the two methods do not show significant differences in estimating regression parameters. The REML estimation method is slightly better in reducing the bias of variance component estimates.     

Inference for Burr XII distribution under Type I progressive hybrid censoring

We consider estimation of unknown parameters of a Burr XII distribution based on progressively Type I hybrid censored data. The maximum likelihood estimates are obtained using an expectation maximization algorithm. Asymptotic interval estimates are constructed from the Fisher information matrix. We obtain Bayes estimates under the squared error loss function using the Lindley method and Metropolis–Hastings algorithm. The predictive estimates of censored observations are obtained and the corresponding prediction intervals are also constructed. We compare the performance of the different methods using simulations. Two real datasets have been analyzed for illustrative purposes.     

Gamma lifetimes and associated inference for interval-censored cure rate model with COM–Poisson competing cause

In this article, we consider a competing cause scenario and assume the wider family of Conway–Maxwell–Poisson (COM–Poisson) distribution to model the number of competing causes. Assuming the type of the data to be interval censored, the main contribution is in developing the steps of the expectation maximization (EM) algorithm to determine the maximum likelihood estimates (MLEs) of the model parameters. A profile likelihood approach within the EM framework is proposed to estimate the COM–Poisson shape parameter. An extensive simulation study is conducted to evaluate the performance of the proposed EM algorithm. Model selection within the wider class of COM–Poisson distribution is carried out using likelihood ratio test and information-based criteria. A study to demonstrate the effect of model mis-specification is also carried out. Finally, the proposed estimation method is applied to a data on smoking cessation and a detailed analysis of the obtained results is presented.     

Robust methods for generalized linear models with nonignorable missing covariates

The EM algorithm is often used for finding the maximum likelihood estimates in generalized linear models with incomplete data. In this article, the author presents a robust method in the framework of the maximum likelihood estimation for fitting generalized linear models when nonignorable covariates are missing. His robust approach is useful for downweighting any influential observations when estimating the model parameters. To avoid computational problems involving irreducibly high‐dimensional integrals, he adopts a Metropolis‐Hastings algorithm based on a Markov chain sampling method. He carries out simulations to investigate the behaviour of the robust estimates in the presence of outliers and missing covariates; furthermore, he compares these estimates to the classical maximum likelihood estimates. Finally, he illustrates his approach using data on the occurrence of delirium in patients operated on for abdominal aortic aneurysm.     

Posterior analysis of the compound Rayleigh distribution under balanced loss functions for censored data

This paper develops Bayesian analysis in the context of progressively Type II censored data from the compound Rayleigh distribution. The maximum likelihood and Bayes estimates along with associated posterior risks are derived for reliability performances under balanced loss functions by assuming continuous priors for parameters of the distribution. A practical example is used to illustrate the estimation methods. A simulation study has been carried out to compare the performance of estimates. The study indicates that Bayesian estimation should be preferred over maximum likelihood estimation. In Bayesian estimation, the balance general entropy loss function can be effectively employed for optimal decision-making.     

Parameter estimation for a new distribution for the strength of brittle fibers: a simulation study

Parameter estimates of a new distribution for the strength of brittle fibers and composite materials are considered. An algorithm for generating random numbers from the distribution is suggested. Two parameter estimation methods, one based on a simple least squares procedure and the other based on the maximum likelihood principle, are studied using Monte Carlo simulation. In most cases, the maximum likelihood estimators were found to have somewhat smaller root mean squared error and bias than the least squares estimators. However, the least squares estimates are generally good and provide useful initial values for the numerical iteration used to find the maximum likelihood estimates.