An inverse-probability-weighted approach to estimation of the bivariate survival function under left-truncation and right-censoring

In this note, we consider estimating the bivariate survival function when both survival times are subject to random left truncation and one of the survival times is subject to random right censoring. Motivated by Satten and Datta [2001. The Kaplan–Meier estimator as an inverse-probability-of-censoring weighted average. Amer. Statist. 55, 207–210], we propose an inverse-probability-weighted (IPW) estimator. It involves simultaneous estimation of the bivariate survival function of the truncation variables and that of the censoring variable and the truncation variable of the uncensored components. We prove that (i) when there is no censoring, the IPW estimator reduces to NPMLE of van der Laan [1996a. Nonparametric estimation of the bivariate survival function with truncated data. J. Multivariate Anal. 58, 107–131] and (ii) when there is random left truncation and right censoring on only one of the components and the other component is always observed, the IPW estimator reduces to the estimator of Gijbels and Gürler [1998. Covariance function of a bivariate distribution function estimator for left truncated and right censored data. Statist. Sin. 1219–1232]. Based on Theorem 3.1 of van der Laan [1996a. Nonparametric estimation of the bivariate survival function with truncated data. J. Multivariate Anal. 58, 107–131, 1996b. Efficient estimation of the bivariate censoring model and repairing NPMLE. Ann. Statist. 24, 596–627], we prove that the IPW estimator is consistent under certain conditions. Finally, we examine the finite sample performance of the IPW estimator in some simulation studies. For the special case that censoring time is independent of truncation time, a simulation study is conducted to compare the performances of the IPW estimator against that of the estimator proposed by van der Laan [1996a. Nonparametric estimation of the bivariate survival function with truncated data. J. Multivariate Anal. 58, 107–131, 1996b. Efficient estimation of the bivariate censoring model and repairing NPMLE. Ann. Statist. 24, 596–627]. For the special case (i), a simulation study is conducted to compare the performances of the IPW estimator against that of the estimator proposed by Huang et al. (2001. Nonnparametric estimation of marginal distributions under bivariate truncation with application to testing for age-of-onset application. Statist. Sin. 11, 1047–1068).     

Nonparametric Estimation of Sojourn Time Distributions for Truncated Serial Event Data—a Weight-adjusted Approach

In follow-up studies, survival data often include subjects who have had a certain event at recruitment and may potentially experience a series of subsequent events during the follow-up period. This kind of survival data collected under a cross-sectional sampling criterion is called truncated serial event data. The outcome variables of interest in this paper are serial sojourn times between successive events. To analyze the sojourn times in truncated serial event data, we need to confront two potential sampling biases arising simultaneously from a sampling criterion and induced informative censoring. In this study, nonparametric estimation of the joint probability function of serial sojourn times is developed by using inverse probabilities of the truncation and censoring times as weight functions to accommodate these two sampling biases under various situations of truncation and censoring. Relevant statistical properties of the proposed estimators are also discussed. Simulation studies and two real data are presented to illustrate the proposed methods.     

A polar coordinate transformation for estimating bivariate survival functions with randomly censored and truncated data

This paper proposes a new estimator for bivariate distribution functions under random truncation and random censoring. The new method is based on a polar coordinate transformation, which enables us to transform a bivariate survival function to a univariate survival function. A consistent estimator for the transformed univariate function is proposed. Then the univariate estimator is transformed back to a bivariate estimator. The estimator converges weakly to a zero-mean Gaussian process with an easily estimated covariance function. Consistent truncation probability estimate is also provided. Numerical studies show that the distribution estimator and truncation probability estimator perform remarkably well.     

Nonparametric estimation of the bivariate survival function with left-truncated and right-censored data

In this note, we consider estimating the bivariate survival function when both components are subject to left truncation and right censoring. We propose two types of estimators as generalizations of the Dabrowska and Campbell and Földes estimators. The consistency of the proposed estimators is established. A simple bootstrap method is used for obtaining precision estimation of the proposed estimators. A simulation study is conducted to investigate the performance of the proposed estimators.     

Weak Convergence of the Wild Bootstrap for the Aalen–Johansen Estimator of the Cumulative Incidence Function of a Competing Risk

Abstract. We give a rigorous study of weak convergence of the wild bootstrap for non‐parametric estimation of the cumulative event probability of a competing risk. The data may be subject to independent left‐truncation and right‐censoring. Inclusion of left‐truncation is motivated by a study on pregnancy outcomes. The wild bootstrap includes as one case a popular resampling technique, where the limit distribution is approximated by repeatedly generating standard normal variates, while the data are kept fixed. Simulation results and a data example are also presented.     

Estimation of the joint survival function for successive duration times under double-truncation and right-censoring

ABSTRACT

In incident cohort studies, survival data often include subjects who have had an initiate event at recruitment and may potentially experience two successive events (first and second) during the follow-up period. When disease registries or surveillance systems collect data based on incidence occurring within a specific calendar time interval, the initial event is usually subject to double truncation. Furthermore, since the second duration process is observable only if the first event has occurred, double truncation and dependent censoring arise. In this article, under the two sampling biases with an unspecified distribution of truncation variables, we propose a nonparametric estimator of the joint survival function of two successive duration times using the inverse-probability-weighted (IPW) approach. The consistency of the proposed estimator is established. Based on the estimated marginal survival functions, we also propose a two-stage estimation procedure for estimating the parameters of copula model. The bootstrap method is used to construct confidence interval. Numerical studies demonstrate that the proposed estimation approaches perform well with moderate sample sizes.     

Nonparametric tests for left-truncated and interval-censored data

This paper considers two-sample nonparametric comparison of survival function when data are subject to left truncation and interval censoring. We propose a class of rank-based tests, which are generalization of weighted log-rank tests for right-censored data. Simulation studies indicate that the proposed tests are appropriate for practical use.     

Progressive censoring with fixed censoring times

In this paper, we revisit the progressive Type-I censoring scheme as it has originally been introduced by Cohen [Progressively censored samples in life testing. Technometrics. 1963;5(3):327–339]. In fact, original progressive Type-I censoring proceeds as progressive Type-II censoring but with fixed censoring times instead of failure time based censoring times. Apparently, a time truncation has been added to this censoring scheme by interpreting the final censoring time as a termination time. Therefore, not much work has been done on Cohens's original progressive censoring scheme with fixed censoring times. Thus, we discuss distributional results for this scheme and establish exact distributional results in likelihood inference for exponentially distributed lifetimes. In particular, we obtain the exact distribution of the maximum likelihood estimator (MLE). Further, the stochastic monotonicity of the MLE is verified in order to construct exact confidence intervals for both the scale parameter and the reliability.     

Estimation of the joint survival function for three successive duration times under double truncation and right censoring

In incident cohort studies, it is common to include subjects who have experienced a certain event within a calendar time window. For all the included individuals, the time of the previous events is retrospectively confirmed and the occurrence of subsequent events is observed during the follow-up periods. During the follow-up periods, subjects may undergo three successive events. Since the second/third duration process becomes observable only if the first/second event has occurred, the data is subject to double truncation and right censoring. We consider two cases: the case when the first event time is subject to double truncation and the case when the second event time is subject to double truncation. Using the inverse-probability-weighted approach, we propose nonparametric and semiparametric estimators for the estimation of the joint survival function of three successive duration times. We establish the asymptotic properties of the proposed estimators and conduct a simulation study to investigate the finite sample properties of the proposed estimators.     

Estimation of Survival Function Subject to Time-Dependent Covariates and Left Truncation

Abstract

Satten et al. [Satten, G. A., Datta, S., Robins, J. M. (2001). Estimating the marginal survival function in the presence of time dependent covariates. Statis. Prob. Lett. 54: 397--403] proposed an estimator [denoted by ?(t)] of survival function of failure times that is in the class of survival function estimators proposed by Robins [Robins, J. M. (1993). Information recovery and bias adjustment in proportional hazards regression analysis of randomized trials using surrogate markers. In: Proceedings of the American Statistical Association-Biopharmaceutical Section. Alexandria, VA: ASA, pp. 24--33]. The estimator is appropriate when data are subject to dependent censoring. In this article, it is demonstrated that the estimator ?(t) can be extended to estimate the survival function when data are subject to dependent censoring and left truncation. In addition, we propose an alternative estimator of survival function [denoted by ? _w (t)] that is represented as an inverse-probability-weighted average Satten and Datta [Satten, G. A., Datta, S. (2001). The Kaplan–Meier estimator as an inverse-probability-of-censoring weighted average. Amer. Statist. Ass. 55: 207--210]. Simulation results show that when truncation is not severe the mean squared error of ?(t) is smaller than that of ? _w (t), except for the case when censoring is light. However, when truncation is severe, ? _w (t) has the advantage of less bias and the situation can be reversed.     

On a measure of information gain for regression models in survival analysis

Papers dealing with measures of predictive power in survival analysis have seen their independence of censoring, or their estimates being unbiased under censoring, as the most important property. We argue that this property has been wrongly understood. Discussing the so-called measure of information gain, we point out that we cannot have unbiased estimates if all values, greater than a given time τ, are censored. This is due to the fact that censoring before τ has a different effect than censoring after τ. Such τ is often introduced by design of a study. Independence can only be achieved under the assumption of the model being valid after τ, which is impossible to verify. But if one is willing to make such an assumption, we suggest using multiple imputation to obtain a consistent estimate. We further show that censoring has different effects on the estimation of the measure for the Cox model than for parametric models, and we discuss them separately. We also give some warnings about the usage of the measure, especially when it comes to comparing essentially different models.     

Smoothed empirical likelihood confidence intervals for the relative distribution with left‐truncated and right‐censored data

The study of differences among groups is an interesting statistical topic in many applied fields. It is very common in this context to have data that are subject to mechanisms of loss of information, such as censoring and truncation. In the setting of a two‐sample problem with data subject to left truncation and right censoring, we develop an empirical likelihood method to do inference for the relative distribution. We obtain a nonparametric generalization of Wilks' theorem and construct nonparametric pointwise confidence intervals for the relative distribution. Finally, we analyse the coverage probability and length of these confidence intervals through a simulation study and illustrate their use with a real data set on gastric cancer. The Canadian Journal of Statistics 38: 453–473; 2010 © 2010 Statistical Society of Canada     

Quantile regression methods for left-truncated and right-censored data

Left-truncated and right-censored (LTRC) data are encountered frequently due to a prevalent cohort sampling in follow-up studies. Because of the skewness of the distribution of survival time, quantile regression is a useful alternative to the Cox's proportional hazards model and the accelerated failure time model for survival analysis. In this paper, we apply the quantile regression model to LTRC data and develops an unbiased estimating equation for regression coefficients. The proposed estimation methods use the inverse probabilities of truncation and censoring weighting technique. The resulting estimator is uniformly consistent and asymptotically normal. The finite-sample performance of the proposed estimation methods is also evaluated using extensive simulation studies. Finally, analysis of real data is presented to illustrate our proposed estimation methods.     

Variable screening for survival data in the presence of heterogeneous censoring

Variable screening for censored survival data is most challenging when both survival and censoring times are correlated with an ultrahigh-dimensional vector of covariates. Existing approaches to handling censoring often make use of inverse probability weighting by assuming independent censoring with both survival time and covariates. This is a convenient but rather restrictive assumption which may be unmet in real applications, especially when the censoring mechanism is complex and the number of covariates is large. To accommodate heterogeneous (covariate-dependent) censoring that is often present in high-dimensional survival data, we propose a Gehan-type rank screening method to select features that are relevant to the survival time. The method is invariant to monotone transformations of the response and of the predictors, and works robustly for a general class of survival models. We establish the sure screening property of the proposed methodology. Simulation studies and a lymphoma data analysis demonstrate its favorable performance and practical utility.     

For censored and truncated data

In this paper we develop nonparametric methods for regression analysis when the response variable is subject to censoring and/or truncation. The development is based on a data completion princple that enables us to apply, via an iterative scheme, nonparametric regression techniques to iteratively com¬pleted data from a given sample with censored and/or truncated observations. In particular, locally weighted regression smoothers and additive regression models are extended to left-truncated and right-censored data Nonparamet¬ric regression analysis is applied to the Stanford heart transplant data, which have been analyzed by previous authors using semiparametric regression meth¬ods. and provides new insights into the relationship between expected survival time after a heart transplant and explanatory variables.     

On Consistency of the Self-Consistent Estimator of Survival Functions with Interval-Censored Data

The self-consistent estimator is commonly used for estimating a survival function with interval-censored data. Recent studies on interval censoring have focused on case 2 interval censoring, which does not involve exact observations, and double censoring, which involves only exact, right-censored or left-censored observations. In this paper, we consider an interval censoring scheme that involves exact, left-censored, right-censored and strictly interval-censored observations. Under this censoring scheme, we prove that the self-consistent estimator is strongly consistent under certain regularity conditions.     

A maximum likelihood estimator for left-truncated lifetimes based on probabilistic prior information about time of occurrence

In forestry, many processes of interest are binary and they can be modeled using lifetime analysis. However, available data are often incomplete, being interval- and right-censored as well as left-truncated, which may lead to biased parameter estimates. While censoring can be easily considered in lifetime analysis, left truncation is more complicated when individual age at selection is unknown. In this study, we designed and tested a maximum likelihood estimator that deals with left truncation by taking advantage of prior knowledge about the time when the individuals enter the experiment. Whenever a model is available for predicting the time of selection, the distribution of the delayed entries can be obtained using Bayes' theorem. It is then possible to marginalize the likelihood function over the distribution of the delayed entries in the experiment to assess the joint distribution of time of selection and time to event. This estimator was tested with continuous and discrete Gompertz-distributed lifetimes. It was then compared with two other estimators: a standard one in which left truncation was not considered and a second estimator that implemented an analytical correction. Our new estimator yielded unbiased parameter estimates with empirical coverage of confidence intervals close to their nominal value. The standard estimator leaded to an overestimation of the long-term probability of survival.     

A class of nonparametric bivariate survival function estimators for randomly censored and truncated data

This paper proposes a class of nonparametric estimators for the bivariate survival function estimation under both random truncation and random censoring. In practice, the pair of random variables under consideration may have certain parametric relationship. The proposed class of nonparametric estimators uses such parametric information via a data transformation approach and thus provides more accurate estimates than existing methods without using such information. The large sample properties of the new class of estimators and a general guidance of how to find a good data transformation are given. The proposed method is also justified via a simulation study and an application on an economic data set.     

Testing for the partial Koziol–Green model with covariates

In this paper we consider some non-parametric goodness-of-fit statistics for testing the partial Koziol–Green regression model. In this model, the response at a given covariate value is subject to random right censoring by two independent censoring times. One of these censoring times is informative in the sense that its survival function is some power of the survival function of the response. The goodness-of-fit statistics are based on an underlying empirical process for which large sample theory is obtained.