Bayesian phylogenetic inference from animal mitochondrial genome arrangements |
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Authors: | Bret Larget Donald L. Simon Joseph B. Kadane |
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Affiliation: | Duquesne University, Pittsburgh, USA; Carnegie Mellon University, Pittsburgh, USA |
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Abstract: | Summary. The determination of evolutionary relationships is a fundamental problem in evolutionary biology. Genome arrangement data are potentially more informative than deoxyribonucleic acid sequence data for inferring evolutionary relationships between distantly related taxa. We describe a Bayesian framework for phylogenetic inference from mitochondrial genome arrangement data using Markov chain Monte Carlo methods. We apply the method to assess evolutionary relationships between eight animal phyla. |
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Keywords: | Break point graph Genome rearrangement Markov chain Monte Carlo methods Phylogeny Signed permutations Sorting by reversal |
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