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A UNIFIED FRAMEWORK FOR MODELLING WILDLIFE POPULATION DYNAMICS†
Authors:Len Thomas  Stephen T. Buckland  Ken B. Newman  John Harwood
Abstract:
This paper proposes a unified framework for defining and fitting stochastic, discrete‐time, discrete‐stage population dynamics models. The biological system is described by a state‐space model, where the true but unknown state of the population is modelled by a state process, and this is linked to survey data by an observation process. All sources of uncertainty in the inputs, including uncertainty about model specification, are readily incorporated. The paper shows how the state process can be represented as a generalization of the standard Leslie or Lefkovitch matrix. By dividing the state process into subprocesses, complex models can be constructed from manageable building blocks. The paper illustrates the approach with a model of the British grey seal metapopulation, using sequential importance sampling with kernel smoothing to fit the model.
Keywords:auxiliary particle filter  ecology  grey seals  Halichoerus grypus  metapopulation  nonlinear stochastic matrix models  sequential importance sampling  state‐space models  wildlife conservation and management
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