Bayesian multivariate normal analysis under the extended reflected normal loss function

This paper considers the Bayesian analysis of the multivariate normal distribution under a new and bounded loss function, based on a reflection of the multivariate normal density function. The Bayes estimators of the mean vector can be derived for an arbitrary prior distribution of [d]. When the covariance matrix has an inverted Wishart prior density, a Bayes estimator of[d] is obtained under a bounded loss function, based on the entropy loss. Finally the admissibility of all linear estimators c[d]+ d for the mean vector is considered     

Non-conjugate prior distribution assessment for multivariate normal sampling

Elicitation methods are proposed for quantifying expert opinion about a multivariate normal sampling model. The natural conjugate prior family imposes a relationship between the mean vector and the covariance matrix that can portray an expert's opinion poorly. Instead we assume that opinions about the mean and the covariance are independent and suggest innovative forms of question which enable the expert to quantify separately his or her opinion about each of these parameters. Prior opinion about the mean vector is modelled by a multivariate normal distribution and about the covariance matrix by both an inverse Wishart distribution and a generalized inverse-Wishart (GIW) distribution. To construct the latter, results are developed that give insight into the GIW parameters and their interrelationships. Certain of the elicitation methods exploit unconditional assessments as fully as possible, since these can reflect an expert's beliefs more accurately than conditional assessments. Methods are illustrated through an example.     

Objective Bayes Factors for Gaussian Directed Acyclic Graphical Models

Abstract. We propose an objective Bayesian method for the comparison of all Gaussian directed acyclic graphical models defined on a given set of variables. The method, which is based on the notion of fractional Bayes factor (BF), requires a single default (typically improper) prior on the space of unconstrained covariance matrices, together with a prior sample size hyper‐parameter, which can be set to its minimal value. We show that our approach produces genuine BFs. The implied prior on the concentration matrix of any complete graph is a data‐dependent Wishart distribution, and this in turn guarantees that Markov equivalent graphs are scored with the same marginal likelihood. We specialize our results to the smaller class of Gaussian decomposable undirected graphical models and show that in this case they coincide with those recently obtained using limiting versions of hyper‐inverse Wishart distributions as priors on the graph‐constrained covariance matrices.     

Bayesian multivariate normal analysis with a wishart prior

This paper considers the Bayesian analysis of the multivariate normal distribution when its covariance matrix has a Wishart prior density under the assumption of a multivariate quadratic loss function. New flexible marginal posterior distributions of the mean μ and of the covariance matrix Σ are developed and univariate cases with graphical representations are given.     

Unbiased Estimator for a Covariance Matrix Under Two-Step Monotone Incomplete Sample

In this article, we consider an inference for a covariance matrix under two-step monotone incomplete sample. The maximum likelihood estimator of the mean vector is unbiased but that of the covariance matrix is biased. We derive an unbiased estimator for the covariance matrix using some fundamental properties of the Wishart matrix. The properties of the estimators are investigated and the accuracies are checked by a numerical simulation.     

Distribution of multivariate quadratic forms under certain covariance structures

Necessary and sufficient conditions are given for the covariance structure of all the observations in a multivariate factorial experiment under which certain multivariate quadratic forms are independent and distributed as a constant times a Wishart. It is also shown that exact multivariate test statistics can be formed for certain covariance structures of the observations when the assumption of equal covariance matrices for each normal population is relaxed. A characterization is given for the dependency structure between random vectors in which the sample mean and sample covariance matrix have certain properties.     

Independence distribution preserving joint covariance structures for the multivariate two-group case

We characterize the general nonnegative-definite and positive-definite joint observation covariance structures for the two-group case such that the two sample mean vectors are independent of the two corresponding sample covariance matrices. Also, the sample covariance matrices are distributed as independent noncentral or central Wishart random matrices. We derive and utilize a representation of the general common non-negative-definite solution to a particular system of matrix equations with idempotent coefficient matrices.     

A prior for the variance in hierarchical models

The choice of prior distributions for the variances can be important and quite difficult in Bayesian hierarchical and variance component models. For situations where little prior information is available, a ‘nonin-formative’ type prior is usually chosen. ‘Noninformative’ priors have been discussed by many authors and used in many contexts. However, care must be taken using these prior distributions as many are improper and thus, can lead to improper posterior distributions. Additionally, in small samples, these priors can be ‘informative’. In this paper, we investigate a proper ‘vague’ prior, the uniform shrinkage prior (Strawder-man 1971; Christiansen & Morris 1997). We discuss its properties and show how posterior distributions for common hierarchical models using this prior lead to proper posterior distributions. We also illustrate the attractive frequentist properties of this prior for a normal hierarchical model including testing and estimation. To conclude, we generalize this prior to the multivariate situation of a covariance matrix.     

Reference prior bayes estimator for bivariate normal covariance matrix with risk comparison

The explicit form of the reference prior bayes estimator due to Yang and Ber-ger (1994) for bivariate normal covariance matrix under entropy loss is given in terms of Legendre polynomials when degrees of freedom is even and in terms of hypergeometric functions in general case. The finite series expression of the density function of the ratio of latent roots of bivariate Wishart matrix is obtained and the exact risk is compared with those of James-Stein minimax estimator and other orthogonally equivariant estimators. It is found numerically that the reference prior bayes estimator has the smallest risk among the class of equivariant estimators compared, when the ratio of the largest to the smallest population latent roots of covariance matrix lies in the middle of the interval [1, ∞]. It has larger risk than that of James-Stein minimax estimator when the ratio is large. Moreover it has larger risk than that of MLE when, for instance, degrees of freedom is 20 and the ratio lies between 4 and 8.     

On the Predictive Distributions of Outcome Gains in the Presence of an Unidentified Parameter

In this article we describe methods for obtaining the predictive distributions of outcome gains in the framework of a standard latent variable selection model. Although most previous work has focused on estimation of mean treatment parameters as the method for characterizing outcome gains from program participation, we show how the entire distributions associated with these gains can be obtained in certain situations. Although the out-of-sample outcome gain distributions depend on an unidentified parameter, we use the results of Koop and Poirier to show that learning can take place about this parameter through information contained in the identified parameters via a positive definiteness restriction on the covariance matrix. In cases where this type of learning is not highly informative, the spread of the predictive distributions depends more critically on the prior. We show both theoretically and in extensive generated data experiments how learning occurs, and delineate the sensitivity of our results to the prior specifications. We relate our analysis to three treatment parameters widely used in the evaluation literature—the average treatment effect, the effect of treatment on the treated, and the local average treatment effect—and show how one might approach estimation of the predictive distributions associated with these outcome gains rather than simply the estimation of mean effects. We apply these techniques to predict the effect of literacy on the weekly wages of a sample of New Jersey child laborers in 1903.     

An asymptotic expansion of Wishart distribution when the population eigenvalues are infinitely dispersed

Takemura and Sheena [A. Takemura, Y. Sheena, Distribution of eigenvalues and eigenvectors of Wishart matrix when the population eigenvalues are infinitely dispersed and its application to minimax estimation of covariance matrix, J. Multivariate Anal. 94 (2005) 271–299] derived the asymptotic joint distribution of the eigenvalues and the eigenvectors of a Wishart matrix when the population eigenvalues become infinitely dispersed. They also showed necessary conditions for an estimator of the population covariance matrix to be tail minimax for typical loss functions by calculating the asymptotic risk of the estimator. In this paper, we further examine those distributions and risks by means of an asymptotic expansion. We obtain the asymptotic expansion of the distribution function of relevant elements of the sample eigenvalues and eigenvectors. We also derive the asymptotic expansion of the risk function of a scale and orthogonally equivariant estimator with respect to Stein’s loss. As an application, we prove non-minimaxity of Stein’s and Haff’s estimators, which has been an open problem for a long time.     

Bayesian covariance matrix estimation using a mixture of decomposable graphical models

We present a Bayesian approach to estimating a covariance matrix by using a prior that is a mixture over all decomposable graphs, with the probability of each graph size specified by the user and graphs of equal size assigned equal probability. Most previous approaches assume that all graphs are equally probable. We show empirically that the prior that assigns equal probability over graph sizes outperforms the prior that assigns equal probability over all graphs in more efficiently estimating the covariance matrix. The prior requires knowing the number of decomposable graphs for each graph size and we give a simulation method for estimating these counts. We also present a Markov chain Monte Carlo method for estimating the posterior distribution of the covariance matrix that is much more efficient than current methods. Both the prior and the simulation method to evaluate the prior apply generally to any decomposable graphical model.     

A monte carlo study on two methods of calculating the mle's covariance matrix in a seemingly unrelated nonlinear regression.

Econometric techniques to estimate output supply systems, factor demand systems and consumer demand systems have often required estimating a nonlinear system of equations that have an additive error structure when written in reduced form. To calculate the ML estimate's covariance matrix of this nonlinear system one can either invert the Hessian of the concentrated log likelihood function, or invert the matrix calculated by pre-multiplying and post multiplying the inverted MLE of the disturbance covariance matrix by the Jacobian of the reduced form model. Malinvaud has shown that the latter of these methods is the actual limiting distribution's covariance matrix, while Barnett has shown that the former is only an approximation.

In this paper, we use a Monte Carlo simulation study to determine how these two covariance matrices differ with respect to the nonlinearity of the model, the number of observations in the dataet, and the residual process. We find that the covariance matrix calculated from the Hessian of the concentrated likelihood function produces Wald statistics that are distributed above those calculated with the other covariance matrix. This difference becomes insignificant as the sample size increases to one-hundred or more observations, suggesting that the asymptotics of the two covariance matrices are quickly reached.     

Bayesian Estimation of the Change Point Using X¯ Control Chart

The process personnel always seek the opportunity to improve the processes. One of the essential steps for process improvement is to quickly recognize the starting time or the change point of a process disturbance. The proposed approach combines the X¯ control chart with the Bayesian estimation technique. We show that the control chart has some information about the change point and this information can be used to make an informative prior. Then two Bayes estimators corresponding to the informative and a non informative prior along with MLE are considered. Their efficiencies are compared through a series of simulations. The results show that the Bayes estimator with the informative prior is more accurate and more precise when the means of the process before and after the change point time are not too closed. In addition, the efficiency of the Bayes estimator with the informative prior increases as the change point goes away from the origin.     

Maximum likelihood estimation of parameter structures for the Wishart distribution using constraints

Maximum likelihood estimation under constraints for estimation in the Wishart class of distributions, is considered. It provides a unified approach to estimation in a variety of problems concerning covariance matrices. Virtually all covariance structures can be translated to constraints on the covariances. This includes covariance matrices with given structure such as linearly patterned covariance matrices, covariance matrices with zeros, independent covariance matrices and structurally dependent covariance matrices. The methodology followed in this paper provides a useful and simple approach to directly obtain the exact maximum likelihood estimates. These maximum likelihood estimates are obtained via an estimation procedure for the exponential class using constraints.     

A monte carlo study on two methods of calculating the mle's covariance matrix in a seemingly unrelated nonlinear regression. *

Econometric techniques to estimate output supply systems, factor demand systems and consumer demand systems have often required estimating a nonlinear system of equations that have an additive error structure when written in reduced form. To calculate the ML estimate's covariance matrix of this nonlinear system one can either invert the Hessian of the concentrated log likelihood function, or invert the matrix calculated by pre-multiplying and post multiplying the inverted MLE of the disturbance covariance matrix by the Jacobian of the reduced form model. Malinvaud has shown that the latter of these methods is the actual limiting distribution's covariance matrix, while Barnett has shown that the former is only an approximation.

In this paper, we use a Monte Carlo simulation study to determine how these two covariance matrices differ with respect to the nonlinearity of the model, the number of observations in the dataet, and the residual process. We find that the covariance matrix calculated from the Hessian of the concentrated likelihood function produces Wald statistics that are distributed above those calculated with the other covariance matrix. This difference becomes insignificant as the sample size increases to one-hundred or more observations, suggesting that the asymptotics of the two covariance matrices are quickly reached.     

Covariance Matrix Estimation via Network Structure

In this article, we employ a regression formulation to estimate the high-dimensional covariance matrix for a given network structure. Using prior information contained in the network relationships, we model the covariance as a polynomial function of the symmetric adjacency matrix. Accordingly, the problem of estimating a high-dimensional covariance matrix is converted to one of estimating low dimensional coefficients of the polynomial regression function, which we can accomplish using ordinary least squares or maximum likelihood. The resulting covariance matrix estimator based on the maximum likelihood approach is guaranteed to be positive definite even in finite samples. Under mild conditions, we obtain the theoretical properties of the resulting estimators. A Bayesian information criterion is also developed to select the order of the polynomial function. Simulation studies and empirical examples illustrate the usefulness of the proposed methods.     

Goodness-of-fit tests for centralized Wishart processes

Abstract

In this paper we present several goodness-of-fit tests for the centralized Wishart process, a popular matrix-variate time series model used to capture the stochastic properties of realized covariance matrices. The new test procedures are based on the extended Bartlett decomposition derived from the properties of the Wishart distribution and allows to obtain sets of independently and standard normally distributed random variables under the null hypothesis. Several tests for normality and independence are then applied to these variables in order to support or to reject the underlying assumption of a centralized Wishart process. In order to investigate the influence of estimated parameters on the suggested testing procedures in the finite-sample case, a simulation study is conducted. Finally, the new test methods are applied to real data consisting of realized covariance matrices computed for the returns on six assets traded on the New York Stock Exchange.     

Bimatrix Variate Beta Type IV Distribution: Relation to Wilks's Statistic and Bimatrix Variate Kummer-Beta Type IV Distribution

In this article, the bimatrix variate beta Type IV distribution is derived from independent Wishart distributed matrix variables. We explore specific properties of this distribution which is then used to derive the exact expressions of the densities of the product and ratio of two dependent Wilks's statistics and to define the bimatrix Kummer-beta Type IV distribution.     

Uniformity of Node Level Conflict Measures in Bayesian Hierarchical Models Based on Directed Acyclic Graphs

Hierarchical models defined by means of directed, acyclic graphs are a powerful and widely used tool for Bayesian analysis of problems of varying degrees of complexity. A simulation‐based method for model criticism in such models has been suggested by O'Hagan in the form of a conflict measure based on contrasting separate local information sources about each node in the graph. This measure is however not well calibrated. In order to rectify this, alternative mutually similar tail probability‐based measures have been proposed independently and have been proved to be uniformly distributed under the assumed model in quite general normal models with known covariance matrices. In the present paper, we extend this result to a variety of models. An advantage of this is that computationally costly pre‐calibration schemes needed for some other suggested methods can be avoided. Another advantage is that non‐informative prior distributions can be used when performing model criticism.