Multivariate generalizations of jonckheere's test for ordered alternatives

In many dose-response studies, each of several independent groups of animals is treated with a different dose of a substance. Many response variables are then measured on each animal. The distributions of the response variables may be nonnormal, and Jonckheere's (1954) test for ordered alternatives in the one-way layout is sometimes used to test whether the level of a single variable increases with increasing dose. In some applications, however, it is important to consider a set of response variables simultaneously. For instance, an increase in each of certain enzymes in the blood serum may suggest liver damage. To test whether these enzyme levels increase with increasing dose, it may be preferable to consider these enzymes as a group, rather than individually.

I propose two multivariate generalizations of Jonckheere's univariate test. Each multivariate test statistic is a function of coordinate-wise Jonckheere statistics—one a sum, the other a quadratic form. The sum statistic can be used to test the alternative hypothesis that each variable is stochastically increasing with increasing dose. The quadratic form statistic is designed for the more general alternative hypothesis that each variable is stochastically ordered with increasing dose.

For each of these two alternatives, I also propose a multivariate generalization of a normal theory test described by Puri (1965). I examine the asymptotic distributions of the four test statistics under the null hypothesis and under translation alternatives and compare each distribution-free test to the corresponding normal theory test in terms of asymptotic relative efficiency.

The multivariate Jonckheere tests are illustrated using does-response data from a subchronic toxicology study carried out by the National Toxicology Program. Four groups of ten male rats each were treated with increasing doses of vinylidene flouride, and the serum enzymes SDH, SGOT, and SGPT were measured. A comparison of univariate Jonckheere tests on each variable, bivariate tests on SDH and SGOT, and multivariate tests on all three variables gives insight into the behavior of the various procedures.     

Power comparison of data depth-based nonparametric tests for testing equality of locations

In the recent years, the notion of data depth has been used in nonparametric multivariate data analysis since it gives natural ‘centre-outward’ ordering of multivariate data points with respect to the given data cloud. In the literature, various nonparametric tests are developed for testing equality of location of two multivariate distributions based on data depth. Here, we define two nonparametric tests based on two different test statistic for testing equality of locations of two multivariate distributions. In the present work, we compare the performance of these tests with the tests developed by Li and Liu [New nonparametric tests of multivariate locations and scales using data depth. Statist Sci. 2004;(1):686–696] for testing equality of locations of two multivariate distributions. Comparison in terms of power is done for multivariate symmetric and skewed distributions using simulation for three popular depth functions. Application of tests to real life data is provided. Conclusion and recommendations are also provided.     

Power Comparison of Multivariate Wilcoxon-type Tests Based on the Jurečková–Kalina’s Ranks of Distances

A multivariate two-sample testing problem is one of the most important topics in nonparametric statistics. One of the multivariate two-sample testing problems based on the Jure?ková–Kalina ranks of distance is discussed in this article. Further, a multivariate Wilcoxon-type test is proposed for testing the equality of two continuous distribution functions. Simulations are used to investigate the power of this test for the two-sided alternative with various population distributions. The results show that the proposed test statistic is more suitable than various existing statistics for testing a shift in the locationt and location-scale parameters.     

Multivariate extension of chi-squared univariate normality test

We propose a multivariate extension of the univariate chi-squared normality test. Using a known result for the distribution of quadratic forms in normal variables, we show that the proposed test statistic has an approximated chi-squared distribution under the null hypothesis of multivariate normality. As in the univariate case, the new test statistic is based on a comparison of observed and expected frequencies for specified events in sample space. In the univariate case, these events are the standard class intervals, but in the multivariate extension we propose these become hyper-ellipsoidal annuli in multivariate sample space. We assess the performance of the new test using Monte Carlo simulation. Keeping the type I error rate fixed, we show that the new test has power that compares favourably with other standard normality tests, though no uniformly most powerful test has been found. We recommend the new test due to its competitive advantages.     

A nonparametric test for interaction in two‐way layouts

The authors present a new nonparametric approach to test for interaction in two‐way layouts. Based on the concept of composite linear rank statistics, they combine the correlated row and column ranking information to construct the test statistic. They determine the limiting distributions of the proposed test statistic under the null hypothesis and Pitman alternatives. They also propose consistent estimators for the limiting covariance matrices associated with the test. They illustrate the application of their test in practical settings using a microarray data set.     

A note on the multivariate multisample rank sum and median tests

The muitivariate nonparametric tests analogous to the univar-iate rank sum test and median test are contained in Puri and Sen (1970). These tests provided a practical alternative for the analysis of multivariate data when the assumptions of parametric methods are not satisfied.

In this paper maximum values for L_Nthe asymptotic chi-Square test statistic for both the Multivariate Multisample Rank Sum Test (MMRST) and the Multivariate Multisample Median Test (MMMT) are developed.     

Nonparametric multiple comparison procedures for unbalanced one-way factorial designs

In this paper, we present several nonparametric multiple comparison (MC) procedures for unbalanced one-way factorial designs. The nonparametric hypotheses are formulated by using normalized distribution functions and the comparisons are carried out on the basis of the relative treatment effects. The proposed test statistics take the form of linear pseudo rank statistics and the asymptotic joint distribution of the pseudo rank statistics for testing treatments versus control satisfies the multivariate totally positive of order two condition irrespective of the correlations among the rank statistics. Therefore, in the context of MCs of treatments versus control, the nonparametric Simes test is validated for the global testing of the intersection hypothesis. For simultaneous testing of individual hypotheses, the nonparametric Hochberg stepup procedure strongly controls the familywise type I error rate asymptotically. With regard to all pairwise comparisons, we generalize various single-step and stagewise procedures to perform comparisons on the relative treatment effects. To further compare with normal theory counterparts, the asymptotic relative efficiencies of the nonparametric MC procedures with respect to the parametric MC procedures are derived under a sequence of Pitman alternatives in a nonparametric location shift model for unbalanced one-way layouts. Monte Carlo simulations are conducted to demonstrate the validity and power of the proposed nonparametric MC procedures.     

A Nonparametric Test Procedure Based on Quantiles for the Right Censored Data

In this study, we propose nonparametric tests using the several quantile statistics simultaneously for the right censored data. First of all, we consider statistics of the quadratic form with estimated covariance matrices. Then we derive the limiting distribution using the large sample approximation theory. Also we consider different forms of statistics such as the maximal and summing types with their limiting distributions. Then we illustrate our procedure with examples and compare performance among tests with empirical powers through a simulation study. Also we comment briefly on some interesting features including re-sampling methods as concluding remarks. Finally in Appendices, we provide proofs for the theoretic results needed for the derivation of the limiting distributions of the proposed test statistics.     

A permutation test for multivariate data with grouped components

In this paper, we consider a nonparametric test procedure for multivariate data with grouped components under the two sample problem setting. For the construction of the test statistic, we use linear rank statistics which were derived by applying the likelihood ratio principle for each component. For the null distribution of the test statistic, we apply the permutation principle for small or moderate sample sizes and derive the limiting distribution for the large sample case. Also we illustrate our test procedure with an example and compare with other procedures through simulation study. Finally, we discuss some additional interesting features as concluding remarks.     

Smoothed alternatives of the two-sample median and Wilcoxon's rank sum tests

We discuss smoothed rank statistics for testing the location shift parameter of the two-sample problem. They are based on discrete test statistics – the median and Wilcoxon's rank sum tests. For the one-sample problem, Maesono et al. [Smoothed nonparametric tests and their properties. arXiv preprint. 2016; ArXiv:1610.02145] reported that some nonparametric discrete tests have a problem with their p-values because of their discreteness. The p-values of Wilcoxon's test are frequently smaller than those of the median test in the tail area. This leads to an arbitrary choice of the median and Wilcoxon's rank sum tests. To overcome this problem, we propose smoothed versions of those tests. The smoothed tests inherit the good properties of the original tests and are asymptotically equivalent to them. We study the significance probabilities and local asymptotic powers of the proposed tests.     

Group sequential x2 statistic for testing the difference of two mean vectors in clinical trials

In this study we discuss the group sequential procedures for comparing two treatments based on multivariate observations in clinical trials. Also we suppose that a response vector on each of two treatments has a multivariate normal distribution with unknown covariance matrix. Then we propose a group sequential x² statistic in order to carry out repeated significance test for hypothesis of no difference between two population mean vectors. In order to realize the group sequential test where average sample number is reduced, we propose another modified group sequential x² statistic by extension of Jennison and Turnbull ( 1991 ). After construction of repeated confidence boundaries for making the repeated significance test, we compare two group sequential procedures based on two statistics regarding the average sample number and the power of the test in the simulations.     

Comparison of Nonparametric Components in Two Partially Linear Models

In this article, we are concerned with whether the nonparametric functions are parallel from two partial linear models, and propose a test statistic to check the difference of the two functions. The unknown constant α is estimated by using moment method under null models. Nonparametric functions under both null and full models are estimated by using local linear method. The asymptotic properties of parametric and nonparametric components are derived. The test statistic under the null hypothesis is calculated and shown to be asymptotically normal.     

Nonparametric test for the homogeneity of the overall variability

In this paper, we propose a nonparametric test for homogeneity of overall variabilities for two multi-dimensional populations. Comparisons between the proposed nonparametric procedure and the asymptotic parametric procedure and a permutation test based on standardized generalized variances are made when the underlying populations are multivariate normal. We also study the performance of these test procedures when the underlying populations are non-normal. We observe that the nonparametric procedure and the permutation test based on standardized generalized variances are not as powerful as the asymptotic parametric test under normality. However, they are reliable and powerful tests for comparing overall variability under other multivariate distributions such as the multivariate Cauchy, the multivariate Pareto and the multivariate exponential distributions, even with small sample sizes. A Monte Carlo simulation study is used to evaluate the performance of the proposed procedures. An example from an educational study is used to illustrate the proposed nonparametric test.     

A TEST FOR THE NONPARAMETRIC TWO SAMPLE SCALE PROBLEM

We propose a distribution-free test for the nonparametric two sample scale problem. Unlike the other tests for this problem, we do not assume that the two distribution functions have a common median. We assume that they have a common quantile of order a (not necessarily 1/2). The test statistic is a modification of the Sukhatme statistic for the scale problem and the Wilcoxon-Mann-Whitney statistic for stochastic dominance. It is shown that the new test is uniformly more efficient (in the Pitman sense) than the Sukhatme test and has very good efficiency when compared to the Mood test.     

An Asymptotic Characterization of Finite Degree U-statistics With Sample Size-Dependent Kernels: Applications to Nonparametric Estimators and Test Statistics

We provide a simple result on the H-decomposition of a U-statistics that allows for easy determination of its magnitude when the statistic’s kernel depends on the sample size n. The result provides a direct and convenient method to characterize the asymptotic magnitude of semiparametric and nonparametric estimators or test statistics involving high dimensional sums. We illustrate the use of our result in previously studied estimators/test statistics and in a novel nonparametric R² test for overall significance of a nonparametric regression model.     

A resampling procedure for nonparametric combination of several dependent tests

Summary This paper deals with nonparametric methods for combining dependent permutation or randomization tests. Particularly, they are nonparametric with respect to the underlying dependence structure. The methods are based on a without replacement resampling procedure (WRRP) conditional on the observed data, also called conditional simulation, which provide suitable estimates, as good as computing time permits, of the permutational distribution of any statistic. A class C of combining functions is characterized in such a way that all its members, under suitable and reasonable conditions, are found to be consistent and unbiased. Moreover, for some of its members, their almost sure asymptotic equivalence with respect to best tests, in particular cases, is shown. An applicational example to a multivariate permutationalt-paired test is also discussed.     

Nonparametric Covariate-Adjusted Association Tests Based on the Generalized Kendall's Tau()

Identifying the risk factors for comorbidity is important in psychiatric research. Empirically, studies have shown that testing multiple, correlated traits simultaneously is more powerful than testing a single trait at a time in association analysis. Furthermore, for complex diseases, especially mental illnesses and behavioral disorders, the traits are often recorded in different scales such as dichotomous, ordinal and quantitative. In the absence of covariates, nonparametric association tests have been developed for multiple complex traits to study comorbidity. However, genetic studies generally contain measurements of some covariates that may affect the relationship between the risk factors of major interest (such as genes) and the outcomes. While it is relatively easy to adjust these covariates in a parametric model for quantitative traits, it is challenging for multiple complex traits with possibly different scales. In this article, we propose a nonparametric test for multiple complex traits that can adjust for covariate effects. The test aims to achieve an optimal scheme of adjustment by using a maximum statistic calculated from multiple adjusted test statistics. We derive the asymptotic null distribution of the maximum test statistic, and also propose a resampling approach, both of which can be used to assess the significance of our test. Simulations are conducted to compare the type I error and power of the nonparametric adjusted test to the unadjusted test and other existing adjusted tests. The empirical results suggest that our proposed test increases the power through adjustment for covariates when there exist environmental effects, and is more robust to model misspecifications than some existing parametric adjusted tests. We further demonstrate the advantage of our test by analyzing a data set on genetics of alcoholism.     

Tests for homogeneity of risk differences in stratified design with correlated bilateral data

ABSTRACT

Correlated bilateral data arise from stratified studies involving paired body organs in a subject. When it is desirable to conduct inference on the scale of risk difference, one needs first to assess the assumption of homogeneity in risk differences across strata. For testing homogeneity of risk differences, we herein propose eight methods derived respectively from weighted-least-squares (WLS), the Mantel-Haenszel (MH) estimator, the WLS method in combination with inverse hyperbolic tangent transformation, and the test statistics based on their log-transformation, the modified Score test statistic and Likelihood ratio test statistic. Simulation results showed that four of the tests perform well in general, with the tests based on the WLS method and inverse hyperbolic tangent transformation always performing satisfactorily even under small sample size designs. The methods are illustrated with a dataset.     

Linear signed rank tests for hultivariate location

Previously proposed linear signed rank tests for multivariate location are not invariant under linear transformations of the observations, The asymptotic relative efficiencies of the tests 2 with respect to Hotelling's T²test depend on the direction of shift and the covariance matrix of the alternative distributions. For distributions with highly correlated components, the efficiencies of some of these tests can be arbitrarily low; they approach zero for certain multivariate normal alternatives, This article proposes a transformation of the data to be performed prior to standard linear signed rank tests, The resulting procedures have attractive power and efficiency properties compared to the original tests, In particular, for elliptically symmetric contiguous alternafives, the efficiencies of the new tests equal those of corresponding univariate linear signed rank tests with respect to the t test.     

A Necessary Power Divergence Type Family Tests of Multivariate Normality

In a recent article, Cardoso de Oliveira and Ferreira have proposed a multivariate extension of the univariate chi-squared normality test, using a known result for the distribution of quadratic forms in normal variables. In this article, we propose a family of power divergence type test statistics for testing the hypothesis of multinormality. The proposed family of test statistics includes as a particular case the test proposed by Cardoso de Oliveira and Ferreira. We assess the performance of the new family of test statistics by using Monte Carlo simulation. In this context, the type I error rates and the power of the tests are studied, for important family members. Moreover, the performance of significant members of the proposed test statistics are compared with the respective performance of a multivariate normality test, proposed recently by Batsidis and Zografos. Finally, two well-known data sets are used to illustrate the method developed in this article as well as the specialized test of multivariate normality proposed by Batsidis and Zografos.