空间计量模型选择及其模拟分析

空间计量模型的选择是空间计量建模的一个重要组成部分,也是空间计量模型实证分析的关键步骤。本文对空间计量模型选择中的Moran指数检验、LM检验、似然函数、三大信息准则、贝叶斯后验概率、马尔可夫链蒙特卡罗方法做了详细的理论分析。并在此基础之上,通过Matlab编程进行模拟分析,结果表明：在扩充的空间计量模型族中进行模型选择时,基于OLS残差的Moran指数与LM检验均存在较大的局限性,对数似然值最大原则缺少区分度,LM检验只针对SEM和SAR模型的区分有效,信息准则对大多数模型有效,但是也会出现误选。而当给出恰当的M-H算法时,充分利用了似然函数和先验信息的MCMC方法,具有更高的检验效度,特别是在较大的样本条件下得到了完全准确的判断,且对不同阶空间邻接矩阵的空间计量模型的选择也非常有效。     

Criterion for the Selection of a Working Correlation Structure in the Generalized Estimating Equation Approach for Longitudinal Balanced Data

The generalized estimating equation is a popular method for analyzing correlated response data. It is important to determine a proper working correlation matrix at the time of applying the generalized estimating equation since an improper selection sometimes results in inefficient parameter estimates. We propose a criterion for the selection of an appropriate working correlation structure. The proposed criterion is based on a statistic to test the hypothesis that the covariance matrix equals a given matrix, and also measures the discrepancy between the covariance matrix estimator and the specified working covariance matrix. We evaluated the performance of the proposed criterion through simulation studies assuming that for each subject, the number of observations remains the same. The results revealed that when the proposed criterion was adopted, the proportion of selecting a true correlation structure was generally higher than that when other competing approaches were adopted. The proposed criterion was applied to longitudinal wheeze data, and it was suggested that the resultant correlation structure was the most accurate.     

Model Selection Criterion Based on the Multivariate Quasi‐Likelihood for Generalized Estimating Equations

The generalized estimating equations (GEE) approach has attracted considerable interest for the analysis of correlated response data. This paper considers the model selection criterion based on the multivariate quasi‐likelihood (MQL) in the GEE framework. The GEE approach is closely related to the MQL. We derive a necessary and sufficient condition for the uniqueness of the risk function based on the MQL by using properties of differential geometry. Furthermore, we establish a formal derivation of model selection criterion as an asymptotically unbiased estimator of the prediction risk under this condition, and we explicitly take into account the effect of estimating the correlation matrix used in the GEE procedure.     

A PRESS statistic for working correlation structure selection in generalized estimating equations

Generalized estimating equations (GEE) is one of the most commonly used methods for regression analysis of longitudinal data, especially with discrete outcomes. The GEE method accounts for the association among the responses of a subject through a working correlation matrix and its correct specification ensures efficient estimation of the regression parameters in the marginal mean regression model. This study proposes a predicted residual sum of squares (PRESS) statistic as a working correlation selection criterion in GEE. A simulation study is designed to assess the performance of the proposed GEE PRESS criterion and to compare its performance with its counterpart criteria in the literature. The results show that the GEE PRESS criterion has better performance than the weighted error sum of squares SC criterion in all cases but is surpassed in performance by the Gaussian pseudo-likelihood criterion. Lastly, the working correlation selection criteria are illustrated with data from the Coronary Artery Risk Development in Young Adults study.     

Sparse group lasso for multiclass functional logistic regression models

Sparsity-inducing penalties are useful tools for variable selection and are also effective for regression problems where the data are functions. We consider the problem of selecting not only variables but also decision boundaries in multiclass logistic regression models for functional data, using sparse regularization. The parameters of the functional logistic regression model are estimated in the framework of the penalized likelihood method with the sparse group lasso-type penalty, and then tuning parameters for the model are selected using the model selection criterion. The effectiveness of the proposed method is investigated through simulation studies and the analysis of a gene expression data set.     

Focused Information Criterion and Model Averaging in Quantile Regression

In this article, we study model selection and model averaging in quantile regression. Under general conditions, we develop a focused information criterion and a frequentist model average estimator for the parameters in quantile regression model, and examine their theoretical properties. The new procedures provide a robust alternative to the least squares method or likelihood method, and a major advantage of the proposed procedures is that when the variance of random error is infinite, the proposed procedure works beautifully while the least squares method breaks down. A simulation study and a real data example are presented to show that the proposed method performs well with a finite sample and is easy to use in practice.     

Bayesian goodness-of-fit test for censored data

We propose a Bayesian computation and inference method for the Pearson-type chi-squared goodness-of-fit test with right-censored survival data. Our test statistic is derived from the classical Pearson chi-squared test using the differences between the observed and expected counts in the partitioned bins. In the Bayesian paradigm, we generate posterior samples of the model parameter using the Markov chain Monte Carlo procedure. By replacing the maximum likelihood estimator in the quadratic form with a random observation from the posterior distribution of the model parameter, we can easily construct a chi-squared test statistic. The degrees of freedom of the test equal the number of bins and thus is independent of the dimensionality of the underlying parameter vector. The test statistic recovers the conventional Pearson-type chi-squared structure. Moreover, the proposed algorithm circumvents the burden of evaluating the Fisher information matrix, its inverse and the rank of the variance–covariance matrix. We examine the proposed model diagnostic method using simulation studies and illustrate it with a real data set from a prostate cancer study.     

MULTIPLE COMPARISONS OF LOG-LIKELIHOODS AND COMBINING NONNESTED MODELS WITH APPLICATIONS TO PHYLOGENETIC TREE SELECTION

We consider multiple comparisons of log-likelihood's to take account of the multiplicity of testings in selection of nonnested models. A resampling version of the Gupta procedure for the selection problem is used to obtain a set of good models, which are not significantly worse than the maximum likelihood model; i.e., a confidence set of models. Our method is to test which model is better than the other, while the object of the classical testing methods is to find the correct model. Thus the null hypotheses behind these two approaches are very different. Our method and the other commonly used approaches, such as the approximate Bayesian posterior, the bootstrap selection probability, and the LR test against the full model, are applied to the selection of molecular phylogenetic tree of mammal species. Tree selection is a version of the model-based clustering, which is an example of nonnested model selection. It is shown that the structure of the tree selection problem is equivalent to that of the variable selection problem of the multiple regression with some constraints on the combinations of the variables. It turns out that the LR test rejects all the possible trees because of the misspecification of the models, whereas our method gives a reasonable confidence set. For a better understanding of the uncertainty in the selection, we combine the maximum likelihood estimates (MLE's) of the trees to obtain the full model that includes the trees as the submodels by using a linear approximation of the parametric models. The MLE of the phylogeny is then represented as a network of species rather than a tree. A geometrical interpretation of the problem is also discussed.     

Bayesian analysis of paired survival data using a bivariate exponential distribution

We consider a Bayesian analysis method of paired survival data using a bivariate exponential model proposed by Moran (1967, Biometrika 54:385–394). Important features of Moran’s model include that the marginal distributions are exponential and the range of the correlation coefficient is between 0 and 1. These contrast with the popular exponential model with gamma frailty. Despite these nice properties, statistical analysis with Moran’s model has been hampered by lack of a closed form likelihood function. In this paper, we introduce a latent variable to circumvent the difficulty in the Bayesian computation. We also consider a model checking procedure using the predictive Bayesian P-value.     

Cox Regression with Incomplete Covariate Measurements using the EM-algorithm

Ibrahim (1990) used the EM-algorithm to obtain maximum likelihood estimates of the regression parameters in generalized linear models with partially missing covariates. The technique was termed EM by the method of weights. In this paper, we generalize this technique to Cox regression analysis with missing values in the covariates. We specify a full model letting the unobserved covariate values be random and then maximize the observed likelihood. The asymptotic covariance matrix is estimated by the inverse information matrix. The missing data are allowed to be missing at random but also the non-ignorable non-response situation may in principle be considered. Simulation studies indicate that the proposed method is more efficient than the method suggested by Paik & Tsai (1997). We apply the procedure to a clinical trials example with six covariates with three of them having missing values.     

Empirical information criteria for time series forecasting model selection

In this article, we propose a new empirical information criterion (EIC) for model selection which penalizes the likelihood of the data by a non-linear function of the number of parameters in the model. It is designed to be used where there are a large number of time series to be forecast. However, a bootstrap version of the EIC can be used where there is a single time series to be forecast. The EIC provides a data-driven model selection tool that can be tuned to the particular forecasting task.

We compare the EIC with other model selection criteria including Akaike’s information criterion (AIC) and Schwarz’s Bayesian information criterion (BIC). The comparisons show that for the M3 forecasting competition data, the EIC outperforms both the AIC and BIC, particularly for longer forecast horizons. We also compare the criteria on simulated data and find that the EIC does better than existing criteria in that case also.     

Assessing goodness-of-fit of categorical regression models based on case-control data

Demonstrated equivalence between a categorical regression model based on case‐control data and an I‐sample semiparametric selection bias model leads to a new goodness‐of‐fit test. The proposed test statistic is an extension of an existing Kolmogorov–Smirnov‐type statistic and is the weighted average of the absolute differences between two estimated distribution functions in each response category. The paper establishes an optimal property for the maximum semiparametric likelihood estimator of the parameters in the I‐sample semiparametric selection bias model. It also presents a bootstrap procedure, some simulation results and an analysis of two real datasets.     

Selection Strategy for Covariance Structure of Random Effects in Linear Mixed‐effects Models

Linear mixed‐effects models are a powerful tool for modelling longitudinal data and are widely used in practice. For a given set of covariates in a linear mixed‐effects model, selecting the covariance structure of random effects is an important problem. In this paper, we develop a joint likelihood‐based selection criterion. Our criterion is the approximately unbiased estimator of the expected Kullback–Leibler information. This criterion is also asymptotically optimal in the sense that for large samples, estimates based on the covariance matrix selected by the criterion minimize the approximate Kullback–Leibler information. Finite sample performance of the proposed method is assessed by simulation experiments. As an illustration, the criterion is applied to a data set from an AIDS clinical trial.     

Model‐based clustering of longitudinal data

A new family of mixture models for the model‐based clustering of longitudinal data is introduced. The covariance structures of eight members of this new family of models are given and the associated maximum likelihood estimates for the parameters are derived via expectation–maximization (EM) algorithms. The Bayesian information criterion is used for model selection and a convergence criterion based on the Aitken acceleration is used to determine the convergence of these EM algorithms. This new family of models is applied to yeast sporulation time course data, where the models give good clustering performance. Further constraints are then imposed on the decomposition to allow a deeper investigation of the correlation structure of the yeast data. These constraints greatly extend this new family of models, with the addition of many parsimonious models. The Canadian Journal of Statistics 38:153–168; 2010 © 2010 Statistical Society of Canada     

Standard errors for the parameters of graphical Gaussian models

The comparison of an estimated parameter to its standard error, the Wald test, is a well known procedure of classical statistics. Here we discuss its application to graphical Gaussian model selection. First we derive the Fisher information matrix and its inverse about the parameters of any graphical Gaussian model. Both the covariance matrix and its inverse are considered and a comparative analysis of the asymptotic behaviour of their maximum likelihood estimators (m.l.e.s) is carried out. Then we give an example of model selection based on the standard errors. The method is shown to produce almost identical inference to likelihood ratio methods in the example considered.     

The Block Empirical Likelihood Method of the Semivarying Coefficient Model with Application to Longitudinal Data

In this article, we consider a semivarying coefficient model with application to longitudinal data. In order to accommodate the within-group correlation, we apply the block empirical likelihood procedure to semivarying coefficient longitudinal data model, and prove a nonparametric version of Wilks' theorem which can be used to construct the block empirical likelihood confidence region with asymptotically correct coverage probability for the parametric component. In comparison with normal approximations, the proposed method does not require a consistent estimator for the asymptotic covariance matrix, making it easier to conduct inference for the model's parametric component. Simulations demonstrate how the proposed method works.     

Validation of A Heteroscedastic Hazards Regression Model

A Cox-type regression model accommodating heteroscedasticity, with a power factor of the baseline cumulative hazard, is investigated for analyzing data with crossing hazards behavior. Since the approach of partial likelihood cannot eliminate the baseline hazard, an overidentified estimating equation (OEE) approach is introduced in the estimation procedure. Its by-product, a model checking statistic, is presented to test for the overall adequacy of the heteroscedastic model. Further, under the heteroscedastic model setting, we propose two statistics to test the proportional hazards assumption. Implementation of this model is illustrated in a data analysis of a cancer clinical trial.     

Simultaneous variable and factor selection via sparse group lasso in factor analysis

This paper considers variable and factor selection in factor analysis. We treat the factor loadings for each observable variable as a group, and introduce a weighted sparse group lasso penalty to the complete log-likelihood. The proposal simultaneously selects observable variables and latent factors of a factor analysis model in a data-driven fashion; it produces a more flexible and sparse factor loading structure than existing methods. For parameter estimation, we derive an expectation-maximization algorithm that optimizes the penalized log-likelihood. The tuning parameters of the procedure are selected by a likelihood cross-validation criterion that yields satisfactory results in various simulation settings. Simulation results reveal that the proposed method can better identify the possibly sparse structure of the true factor loading matrix with higher estimation accuracy than existing methods. A real data example is also presented to demonstrate its performance in practice.     

A Sample Selection Model with Skew‐normal Distribution

Non‐random sampling is a source of bias in empirical research. It is common for the outcomes of interest (e.g. wage distribution) to be skewed in the source population. Sometimes, the outcomes are further subjected to sample selection, which is a type of missing data, resulting in partial observability. Thus, methods based on complete cases for skew data are inadequate for the analysis of such data and a general sample selection model is required. Heckman proposed a full maximum likelihood estimation method under the normality assumption for sample selection problems, and parametric and non‐parametric extensions have been proposed. We generalize Heckman selection model to allow for underlying skew‐normal distributions. Finite‐sample performance of the maximum likelihood estimator of the model is studied via simulation. Applications illustrate the strength of the model in capturing spurious skewness in bounded scores, and in modelling data where logarithm transformation could not mitigate the effect of inherent skewness in the outcome variable.