Bayesian hierarchical model for the prediction of football results

The problem of modelling football data has become increasingly popular in the last few years and many different models have been proposed with the aim of estimating the characteristics that bring a team to lose or win a game, or to predict the score of a particular match. We propose a Bayesian hierarchical model to fulfil both these aims and test its predictive strength based on data about the Italian Serie A 1991–1992 championship. To overcome the issue of overshrinkage produced by the Bayesian hierarchical model, we specify a more complex mixture model that results in a better fit to the observed data. We test its performance using an example of the Italian Serie A 2007–2008 championship.     

Bayesian analysis of multivariate mortality data with large families

This paper presents a Bayesian method for the analysis of toxicological multivariate mortality data when the discrete mortality rate for each family of subjects at a given time depends on familial random effects and the toxicity level experienced by the family. Our aim is to model and analyse one set of such multivariate mortality data with large family sizes: the potassium thiocyanate (KSCN) tainted fish tank data of O'Hara Hines. The model used is based on a discretized hazard with additional time-varying familial random effects. A similar previous study (using sodium thiocyanate (NaSCN)) is used to construct a prior for the parameters in the current study. A simulation-based approach is used to compute posterior estimates of the model parameters and mortality rates and several other quantities of interest. Recent tools in Bayesian model diagnostics and variable subset selection have been incorporated to verify important modelling assumptions regarding the effects of time and heterogeneity among the families on the mortality rate. Further, Bayesian methods using predictive distributions are used for comparing several plausible models.     

Estimation based on progressive first-failure censoring from exponentiated exponential distribution

In this paper, point and interval estimations for the parameters of the exponentiated exponential (EE) distribution are studied based on progressive first-failure-censored data. The Bayes estimates are computed based on squared error and Linex loss functions and using Markov Chain Monte Carlo (MCMC) algorithm. Also, based on this censoring scheme, approximate confidence intervals for the parameters of EE distribution are developed. Monte Carlo simulation study is carried out to compare the performances of the different methods by computing the estimated risks (ERs), as well as Akaike's information criteria (AIC) and Bayesian information criteria (BIC) of the estimates. Finally, a real data set is introduced and analyzed using EE and Weibull distributions. A comparison is carried out between the mentioned models based on the corresponding Kolmogorov–Smirnov (K–S) test statistic to emphasize that the EE model fits the data with the same efficiency as the other model. Point and interval estimation of all parameters are studied based on this real data set as illustrative example.     

Utilization of treatment effect on a surrogate endpoint for planning a study to evaluate treatment effect on a final endpoint

To design a phase III study with a final endpoint and calculate the required sample size for the desired probability of success, we need a good estimate of the treatment effect on the endpoint. It is prudent to fully utilize all available information including the historical and phase II information of the treatment as well as external data of the other treatments. It is not uncommon that a phase II study may use a surrogate endpoint as the primary endpoint and has no or limited data for the final endpoint. On the other hand, external information from the other studies for the other treatments on the surrogate and final endpoints may be available to establish a relationship between the treatment effects on the two endpoints. Through this relationship, making full use of the surrogate information may enhance the estimate of the treatment effect on the final endpoint. In this research, we propose a bivariate Bayesian analysis approach to comprehensively deal with the problem. A dynamic borrowing approach is considered to regulate the amount of historical data and surrogate information borrowing based on the level of consistency. A much simpler frequentist method is also discussed. Simulations are conducted to compare the performances of different approaches. An example is used to illustrate the applications of the methods.     

Bayesian Inference in Generalized Error and Generalized Student-t Regression Models

This study takes up inference in linear models with generalized error and generalized t distributions. For the generalized error distribution, two computational algorithms are proposed. The first is based on indirect Bayesian inference using an approximating finite scale mixture of normal distributions. The second is based on Gibbs sampling. The Gibbs sampler involves only drawing random numbers from standard distributions. This is important because previously the impression has been that an exact analysis of the generalized error regression model using Gibbs sampling is not possible. Next, we describe computational Bayesian inference for linear models with generalized t disturbances based on Gibbs sampling, and exploiting the fact that the model is a mixture of generalized error distributions with inverse generalized gamma distributions for the scale parameter. The linear model with this specification has also been thought not to be amenable to exact Bayesian analysis. All computational methods are applied to actual data involving the exchange rates of the British pound, the French franc, and the German mark relative to the U.S. dollar.     

BINARY REGRESSION WITH A CLASS OF SKEWED t LINK MODELS

ABSTRACT

In this paper we propose a class of skewed t link models for analyzing binary response data with covariates. It is a class of asymmetric link models designed to improve the overall fit when commonly used symmetric links, such as the logit and probit links, do not provide the best fit available for a given binary response dataset. Introducing a skewed t distribution for the underlying latent variable, we develop the class of models. For the analysis of the models, a Bayesian and non-Bayesian methods are pursued using a Markov chain Monte Carlo (MCMC) sampling based approach. Necessary theories involved in modelling and computation are provided. Finally, a simulation study and a real data example are used to illustrate the proposed methodology.     

Comparison of Mixed-Effects Models for Skew-Normal Responses with an Application to AIDS Data: A Bayesian Approach

The potency of antiretroviral agents in AIDS clinical trials can be assessed on the basis of a viral response such as viral decay rate or change in viral load (number of HIV RNA copies in plasma). Linear, nonlinear, and nonparametric mixed-effects models have been proposed to estimate such parameters in viral dynamic models. However, there are two critical questions that stand out: whether these models achieve consistent estimates for viral decay rates, and which model is more appropriate for use in practice. Moreover, one often assumes that a model random error is normally distributed, but this assumption may be unrealistic, obscuring important features of within- and among-subject variations. In this article, we develop a skew-normal (SN) Bayesian linear mixed-effects (SN-BLME) model, an SN Bayesian nonlinear mixed-effects (SN-BNLME) model, and an SN Bayesian semiparametric nonlinear mixed-effects (SN-BSNLME) model that relax the normality assumption by considering model random error to have an SN distribution. We compare the performance of these SN models, and also compare their performance with the corresponding normal models. An AIDS dataset is used to test the proposed models and methods. It was found that there is a significant incongruity in the estimated viral decay rates. The results indicate that SN-BSNLME model is preferred to the other models, implying that an arbitrary data truncation is not necessary. The findings also suggest that it is important to assume a model with an SN distribution in order to achieve reasonable results when the data exhibit skewness.     

On the dependent competing risks using Marshall–Olkin bivariate Weibull model: Parameter estimation with different methods

Competing risks models are of great importance in reliability and survival analysis. They are often assumed to have independent causes of failure in literature, which may be unreasonable. In this article, dependent causes of failure are considered by using the Marshall–Olkin bivariate Weibull distribution. After deriving some useful results for the model, we use ML, fiducial inference, and Bayesian methods to estimate the unknown model parameters with a parameter transformation. Simulation studies are carried out to assess the performances of the three methods. Compared with the maximum likelihood method, the fiducial and Bayesian methods could provide better parameter estimation.     

Using simulation methods for bayesian econometric models: inference, development,and communication

This paper surveys the fundamental principles of subjective Bayesian inference in econometrics and the implementation of those principles using posterior simulation methods. The emphasis is on the combination of models and the development of predictive distributions. Moving beyond conditioning on a fixed number of completely specified models, the paper introduces subjective Bayesian tools for formal comparison of these models with as yet incompletely specified models. The paper then shows how posterior simulators can facilitate communication between investigators (for example, econometricians) on the one hand and remote clients (for example, decision makers) on the other, enabling clients to vary the prior distributions and functions of interest employed by investigators. A theme of the paper is the practicality of subjective Bayesian methods. To this end, the paper describes publicly available software for Bayesian inference, model development, and communication and provides illustrations using two simple econometric models.     

Non-mixture cure correlated frailty models in Bayesian approach

In this article, we develop a Bayesian approach for the estimation of two cure correlated frailty models that have been extended to the cure frailty models introduced by Yin [34]. We used the two different type of frailty with bivariate log-normal distribution instead of gamma distribution. A likelihood function was constructed based on a piecewise exponential distribution function. The model parameters were estimated by the Markov chain Monte Carlo method. The comparison of models is based on the Cox correlated frailty model with log-normal distribution. A real data set of bilateral corneal graft rejection was used to compare these models. The results of this data, based on deviance information criteria, showed the advantage of the proposed models.     

Nonparametric test for the homogeneity of the overall variability

In this paper, we propose a nonparametric test for homogeneity of overall variabilities for two multi-dimensional populations. Comparisons between the proposed nonparametric procedure and the asymptotic parametric procedure and a permutation test based on standardized generalized variances are made when the underlying populations are multivariate normal. We also study the performance of these test procedures when the underlying populations are non-normal. We observe that the nonparametric procedure and the permutation test based on standardized generalized variances are not as powerful as the asymptotic parametric test under normality. However, they are reliable and powerful tests for comparing overall variability under other multivariate distributions such as the multivariate Cauchy, the multivariate Pareto and the multivariate exponential distributions, even with small sample sizes. A Monte Carlo simulation study is used to evaluate the performance of the proposed procedures. An example from an educational study is used to illustrate the proposed nonparametric test.     

A Bayesian semiparametric model for non negative semicontinuous data

When the target variable exhibits a semicontinuous behavior (a point mass in a single value and a continuous distribution elsewhere), parametric “two-part models” have been extensively used and investigated. The applications have mainly been related to non negative variables with a point mass in zero (zero-inflated data). In this article, a semiparametric Bayesian two-part model for dealing with such variables is proposed. The model allows a semiparametric expression for the two parts of the model by using Dirichlet processes. A motivating example, based on grape wine production in Tuscany (an Italian region), is used to show the capabilities of the model. Finally, two simulation experiments evaluate the model. Results show a satisfactory performance of the suggested approach for modeling and predicting semicontinuous data when parametric assumptions are not reasonable.     

HIGH-DIMENSIONAL PARAMETRIC MODELLING OF MULTIVARIATE EXTREME EVENTS

Multivariate extreme events are typically modelled using multivariate extreme value distributions. Unfortunately, there exists no finite parametrization for the class of multivariate extreme value distributions. One common approach is to model extreme events using some flexible parametric subclass. This approach has been limited to only two or three dimensions, primarily because suitably flexible high-dimensional parametric models have prohibitively complex density functions. We present an approach that allows a number of popular flexible models to be used in arbitrarily high dimensions. The approach easily handles missing and censored data, and can be employed when modelling componentwise maxima and multivariate threshold exceedances. The approach is based on a representation using conditionally independent marginal components, conditioning on positive stable random variables. We use Bayesian inference, where the conditioning variables are treated as auxiliary variables within Markov chain Monte Carlo simulations. We demonstrate these methods with an application to sea-levels, using data collected at 10 sites on the east coast of England.     

A Bayesian approach to analysis of covariance in balanced randomized block experiments

Analysis of covariance in designed experiments has a long history dating back to the middle of the twentieth century. Given the popularity of Bayesian approaches to statistical modelling and inference, it is somewhat surprising that there is so little literature on the application of Bayesian methods in this context. This paper proposes methods based on a recent formulation of the problem in terms of a multivariate variance components model which allows for a conjugate Bayesian analysis of balanced randomized block experiments with concomitant information. The analysis is complicated by a linear constraint involving two covariance matrices. Two solutions are proposed and implemented using Markov chain Monte Carlo methods.     

Bayesian estimation and case influence diagnostics for the zero-inflated negative binomial regression model

In recent years, there has been considerable interest in regression models based on zero-inflated distributions. These models are commonly encountered in many disciplines, such as medicine, public health, and environmental sciences, among others. The zero-inflated Poisson (ZIP) model has been typically considered for these types of problems. However, the ZIP model can fail if the non-zero counts are overdispersed in relation to the Poisson distribution, hence the zero-inflated negative binomial (ZINB) model may be more appropriate. In this paper, we present a Bayesian approach for fitting the ZINB regression model. This model considers that an observed zero may come from a point mass distribution at zero or from the negative binomial model. The likelihood function is utilized to compute not only some Bayesian model selection measures, but also to develop Bayesian case-deletion influence diagnostics based on q-divergence measures. The approach can be easily implemented using standard Bayesian software, such as WinBUGS. The performance of the proposed method is evaluated with a simulation study. Further, a real data set is analyzed, where we show that ZINB regression models seems to fit the data better than the Poisson counterpart.     

Scale mixtures log-Birnbaum–Saunders regression models with censored data: a Bayesian approach

The main objective of this paper is to develop a full Bayesian analysis for the Birnbaum–Saunders (BS) regression model based on scale mixtures of the normal (SMN) distribution with right-censored survival data. The BS distributions based on SMN models are a very general approach for analysing lifetime data, which has as special cases the Student-t-BS, slash-BS and the contaminated normal-BS distributions, being a flexible alternative to the use of the corresponding BS distribution or any other well-known compatible model, such as the log-normal distribution. A Gibbs sample algorithm with Metropolis–Hastings algorithm is used to obtain the Bayesian estimates of the parameters. Moreover, some discussions on the model selection to compare the fitted models are given and case-deletion influence diagnostics are developed for the joint posterior distribution based on the Kullback–Leibler divergence. The newly developed procedures are illustrated on a real data set previously analysed under BS regression models.     

Inverse Gaussian process models for bivariate degradation analysis: A Bayesian perspective

This article conducts a Bayesian analysis for bivariate degradation models based on the inverse Gaussian (IG) process. Assume that a product has two quality characteristics (QCs) and each of the QCs is governed by an IG process. The dependence of the QCs is described by a copula function. A bivariate simple IG process model and three bivariate IG process models with random effects are investigated by using Bayesian method. In addition, a simulation example is given to illustrate the effectiveness of the proposed methods. Finally, an example about heavy machine tools is presented to validate the proposed models.     

Bayesian analysis for incomplete multi-way contingency tables with nonignorable nonresponse

We propose Bayesian methods with five types of priors to estimate cell probabilities in an incomplete multi-way contingency table under nonignorable nonresponse. In this situation, the maximum likelihood (ML) estimates often fall in the boundary solution, causing the ML estimates to become unstable. To deal with such a multi-way table, we present an EM algorithm which generalizes the previous algorithm used for incomplete one-way tables. Three of the five types of priors were previously introduced while the other two are newly proposed to reflect different response patterns between respondents and nonrespondents. Data analysis and simulation studies show that Bayesian estimates based on the old three priors can be worse than the ML regardless of occurrence of boundary solution, contrary to previous studies. The Bayesian estimates from the two new priors are most preferable when a boundary solution occurs. We provide an illustrating example using data for a study of the relationship between a mother's smoking and her newborn's weight.     

Basu–Dhar bivariate geometric distribution in the presence of covariates and censored data: a Bayesian approach

In this paper, we introduce classical and Bayesian approaches for the Basu–Dhar bivariate geometric distribution in the presence of covariates and censored data. This distribution is considered for the analysis of bivariate lifetime as an alternative to some existing bivariate lifetime distributions assuming continuous lifetimes as the Block and Basu or Marshall and Olkin bivariate distributions. Maximum likelihood and Bayesian estimators are presented. Two examples are considered to illustrate the proposed methodology: an example with simulated data and an example with medical bivariate lifetime data.     

Bayesian analysis of a linear mixed model with AR(p) errors via MCMC

We develop Bayesian procedures to make inference about parameters of a statistical design with autocorrelated error terms. Modelling treatment effects can be complex in the presence of other factors such as time; for example in longitudinal data. In this paper, Markov chain Monte Carlo methods (MCMC), the Metropolis-Hastings algorithm and Gibbs sampler are used to facilitate the Bayesian analysis of real life data when the error structure can be expressed as an autoregressive model of order p. We illustrate our analysis with real data.