Efficient construction of Bayes optimal designs for stochastic process models

Statistics and Computing - Stochastic process models are now commonly used to analyse complex biological, ecological and industrial systems. Increasingly there is a need to deliver accurate...     

Optimal designs for estimating the slope of a regression

In the common linear model with quantitative predictors we consider the problem of designing experiments for estimating the slope of the expected response in a regression. We discuss locally optimal designs, where the experimenter is only interested in the slope at a particular point, and standardized minimax optimal designs, which could be used if precise estimation of the slope over a given region is required. General results on the number of support points of locally optimal designs are derived if the regression functions form a Chebyshev system. For polynomial regression and Fourier regression models of arbitrary degree the optimal designs for estimating the slope of the regression are determined explicitly for many cases of practical interest.     

Optimal designs for response functions with a downturn

In many toxicological assays, interactions between primary and secondary effects may cause a downturn in mean responses at high doses. In this situation, the typical monotonicity assumption is invalid and may be quite misleading. Prior literature addresses the analysis of response functions with a downturn, but so far as we know, this paper initiates the study of experimental design for this situation. A growth model is combined with a death model to allow for the downturn in mean doses. Several different objective functions are studied. When the number of treatments equals the number of parameters, Fisher information is found to be independent of the model of the treatment means and on the magnitudes of the treatments. In general, A- and D_A-optimal weights for estimating adjacent mean differences are found analytically for a simple model and numerically for a biologically motivated model. Results on c-optimality are also obtained for estimating the peak dose and the EC₅₀ (the treatment with response half way between the control and the peak response on the increasing portion of the response function). Finally, when interest lies only in the increasing portion of the response function, we propose composite D-optimal designs.     

Optimal designs for exponential regression

This paper is concerned with the optimal design problem for the particular case of non-linear parametrisation:the parameters to be estimated are included in exponents.Some properties of locally optimal designs as functions of estimated parameters are investigated and a table of such designs in given.We consider also designs to be optimal in the sense of minimax approach.     

Optimal designs for copula models

Copula modelling has in the past decade become a standard tool in many areas of applied statistics. However, a largely neglected aspect concerns the design of related experiments. Particularly the issue of whether the estimation of copula parameters can be enhanced by optimizing experimental conditions and how robust all the parameter estimates for the model are with respect to the type of copula employed. In this paper an equivalence theorem for (bivariate) copula models is provided that allows formulation of efficient design algorithms and quick checks of whether designs are optimal or at least efficient. Some examples illustrate that in practical situations considerable gains in design efficiency can be achieved. A natural comparison between different copula models with respect to design efficiency is provided as well.     

Optimal designs for the power logistic model

We investigate non-sequential designs for estimating model parameters in a power logistic model when the power is assumed to be approximately known and only the ranges for the other two parameters are available. The sensitivity of these designs to nominal values of all the three parameters are studied and our proposed optimal designs are shown to be reasonably robust under moderate deviation from the assumed model. An application to a toxicity experiment involving adult beetles is discussed, including the benefits of using an optimal design.     

Optimal designs for calibration of orientations

This paper concerns designed experiments involving observations of orientations following the models of Prentice (1989) and Rivest &Chang (2006). The authors state minimal conditions on the designs for consistent least squares estimation of the matrix parameters in these models. The conditions are expressed in terms of the axes and rotation angles of the design orientations. The authors show that designs satisfying U₁ + … + U_n = 0 are optimal in the sense of minimizing the estimation error average angular distance. The authors give constructions of optimal n‐point designs when n ≥ 4 and they compare the performance of several designs through approximations and simulation.     

Optimal designs for experiments with mixtures: a survey

This is a survey article on known results about analytic solutions and numerical solutions of optimal designs for various regression models for experiments with mixtures. The regression models include polynomial models, models containing homogeneous functions, models containing inverse terms and ratios, log contrast models, models with quantitative variables, and mod els containing the amount of mixture, Optimality criteria considered include D-, A-, E-,φ_p- and I_λ-Optimalities. Uniform design and uniform optimal design for mixture components, and efficiencies of the {q,2} simplex-controid design are briefly discussed.     

Optimal designs for tumor regrowth models

Most growth curves can only be used to model the tumor growth under no intervention. To model the growth curves for treated tumor, both the growth delay due to the treatment and the regrowth of the tumor after the treatment need to be taken into account. In this paper, we consider two tumor regrowth models and determine the locally D- and c-optimal designs for these models. We then show that the locally D- and c-optimal designs are minimally supported. We also consider two equally spaced designs as alternative designs and evaluate their efficiencies.     

Optimal designs for generalized linear models

Summary This paper solves some D-optimal design problems for certain Generalized Linear Models where the mean depends on two parameters and two explanatory variables. In all of the cases considered the support point of the optimal designs are found to be independent of the unknown parameters. While in some cases the optimal design measures are given by two points with equal weights, in others the support is given by three point with weights depending on the unknown parameters, hence the designs are locally optimal in general. Empirical results on the efficiency of the locally optimal designs are also given. Some of the designs found can also be used for planning D-optimal experiments for the normal linear model, where the mean must be positive. This research was carried out in part at University College, London as an M.Sc. project. Thanks are due to Prof. I. Ford (University of Glasgow) and Prof. A. Giovagnoli (University of Perugia) for their valuable suggestions and critical observations.     

Optimal change-over designs for correlated observations

Design implications of an autoregressive model for change-over experiments are investigated. In this model, the residual effect due to the previous treatment is assumed to be proportional to the response in the previous period. In addition, the errors from the same experimental subject are assumed to be correlated according to a first-order autoregressive model. Models with fixed and random subject effects are discussed separately. An attempt has been made to identify and construct optimal or nearly optimal designs in various situations. Empirical conclusions of Taka and Armitage [Commun. Statist. Theor. Meth. (1983)12, 865-876] regarding the efficiency of some designs have also been confirmed.     

Optimal designs for covariates’ models

A linear model with one treatment at V levels and first order regression on K continuous covariates with values on a K-cube is considered. The D-criterion is used to judge the ‘goodness’ of any design for estimating the parameters of this model. Since this criterion is based on the determinant of the information matrix M(d) of a design d, upper bounds for |M(d)| yield lower bounds for the D-efficiency of any design d in estimating the vector of parameters in the model. We consider here only classes of designs d for which the number N of observations to be taken is a multiple of V, that is, there exists R≥2 such that N=V×R.Under these conditions, we determine the maximum of |M(d)|, and conditions under which the maximum is attained. These conditions include R being even, each treatment level being observed the same number of times, that is, R times, and N being a multiple of four. For the other cases of congruence of N (modulo 4) we further determine upper bounds on |M (d)| for equireplicated designs, i.e. for designs with equal number of observations per treatment level. These upper bounds are shown to depend also on the congruence of V (modulo 4). For some triples (N,V,K), the upper bounds determined are shown to be attained.Construction methods yielding families of designs which attain the upper bounds of |M(d)| are presented, for each of the sixteen cases of congruence of N and V.We also determine the upper bound for D-optimal designs for estimating only the treatment parameters, when first order regression on one continuous covariate is present.     

Optimal designs for the development of personalized treatment rules

We study the design of multi-armed parallel group clinical trials to estimate personalized treatment rules that identify the best treatment for a given patient with given covariates. Assuming that the outcomes in each treatment arm are given by a homoscedastic linear model, with possibly different variances between treatment arms, and that the trial subjects form a random sample from an unselected overall population, we optimize the (possibly randomized) treatment allocation allowing the allocation rates to depend on the covariates. We find that, for the case of two treatments, the approximately optimal allocation rule does not depend on the value of the covariates but only on the variances of the responses. In contrast, for the case of three treatments or more, the optimal treatment allocation does depend on the values of the covariates as well as the true regression coefficients. The methods are illustrated with a recently published dietary clinical trial.     

Optimal weighing designs with a string property

We consider the usual (spring balance) weighing design set-up with the design matrix having a string property meaning thereby that in every row of it, there is exactly one run of 1's (the rest of the elements being 0's). We have investigated some interesting features of such matrices and used them in deriving various optimality results.     

Optimal discrimination designs for exponential regression models

We investigate optimal designs for discriminating between exponential regression models of different complexity, which are widely used in the biological sciences; see, e.g., Landaw [1995. Robust sampling designs for compartmental models under large prior eigenvalue uncertainties. Math. Comput. Biomed. Appl. 181–187] or Gibaldi and Perrier [1982. Pharmacokinetics. Marcel Dekker, New York]. We discuss different approaches for the construction of appropriate optimality criteria, and find sharper upper bounds on the number of support points of locally optimal discrimination designs than those given by Caratheodory's Theorem. These results greatly facilitate the numerical construction of optimal designs. Various examples of optimal designs are then presented and compared to different other designs. Moreover, to protect the experiment against misspecifications of the nonlinear model parameters, we adapt the design criteria such that the resulting designs are robust with respect to such misspecifications and, again, provide several examples, which demonstrate the advantages of our approach.     

Optimal block designs for double cross experiments

ABSTRACT

This paper presents systematic methods of construction of optimal block designs for a double cross experiments for both even and odd values of “p” parental lines. The both even and odd values of designs are derived by using initial block of unreduced balanced incomplete block designs and initial block of row–column designs given by Bose et al. (1953 Bose, R.C., Shrikhande, S.S., Bhattacharya, K.N. (1953). On the construction of group divisible incomplete block design. Ann. Math. Stat. 24:167–195.[Crossref] , [Google Scholar]) and Gupta and Choi (1998 Gupta, S., Choi, K.C. (1998). Optimal row-column designs for complete diallel crosses. Commun. Stat. Theory Methods 27(11):2827–2835.[Taylor & Francis Online], [Web of Science ®] , [Google Scholar]), respectively. In this attempt we have found some new universally optimal block designs for double cross experiments.