Characterization of certain incomplete block designs

It is shown that certain inequalities known for partially balanced incomplete block (PBIB) designs remain valid for general incomplete block designs. Some conditions for attaining their bounds are also given. Furthermore, the various types of PBIB designs are characterized by relating blocks of designs with association schemes. The approach here is based on the spectral expansion of NN' for the incidence matrix N of an incomplete block design.     

D-optimal block designs with at most six varieties

For given positive integers v, b, and k (all of them ≥2) a block design is a k × b array of the variety labels 1,…,v with blocks as columns. For the usual one-way heterogeneity model in standard form the problem is studied of finding a D-optimal block design for estimating the variety contrasts, when no balanced block design (BBD) exists. The paper presents solutions to this problem for v≤6. The results on D-optimality are derived from a graph-theoretic context. Block designs can be considered as multigraphs, and a block design is D-optimal iff its multigraph has greatest complexity (=number of spanning trees).     

Cyclic designs for a covariate model

A linear model with one treatment at V levels and first order regression on K continuous covariates with values on a K-cube is considered. We restrict our attention to classes of designs d for which the number of observations N to be taken is a multiple of V, i.e. N = V × R with R ≥2, and each treatment level is observed R times. Among these designs, called here equireplicated, there is a subclass characterized by the following: the allocation matrix of each treatment level (for short, allocation matrix) is obtained through cyclic permutation of the columns of the allocation matrix of the first treatment level. We call these designs cyclic. Besides having easy representation, the most efficient cyclic designs are often D-optimal in the class of equireplicated designs. A known upper bound for the determinant of the information matrix M(d) of a design, in the class of equireplicated ones, depends on the congruences of N and V modulo 4. For some combinations of parameter moduli, we give here methods of constructing families of D-optimal cyclic designs. Moreover, for some sets of parameters (N, V,K = V), where the upper bound on ∣M(d)∣ (for that specific combination of moduli) is not attainable, it is also possible to construct highly D-efficient cyclic designs. Finally, for N≤24 and V≤6, computer search was used to determine the most efficient design in the class of cyclic ones. They are presented, together with their respective efficiency in the class of equireplicated designs.     

Incomplete block designs for symmetrical parallel line assays

New series of incomplete block designs for symmetrical parallel lines are proposed. From these designs important contrasts like L_p, L₁ and L′₁ are estimated free from block effects. In addition to these, other odd order contrasts are also estimated orthogonal to block effects. The designs are shown to have simple analysis.     

A note on robustness of D-optimal block designs for two-colour microarray experiments

Two-colour microarray experiments form an important tool in gene expression analysis. Due to the high risk of missing observations in microarray experiments, it is fundamental to concentrate not only on optimal designs but also on designs which are robust against missing observations. As an extension of Latif et al. (2009), we define the optimal breakdown number for a collection of designs to describe the robustness, and we calculate the breakdown number for various D-optimal block designs. We show that, for certain values of the numbers of treatments and arrays, the designs which are D-optimal have the highest breakdown number. Our calculations use methods from graph theory.     

Balanced and partially balanced incomplete block designs with autocorrelation errors

The paper aims to find variance balanced and variance partially balanced incomplete block designs when observations within blocks are autocorrelated and we call them BIBAC and PBIBAC designs. Orthogonal arrays of type I and type II when used as BIBAC designs have smaller average variance of elementary contrasts of treatment effects compared to the corresponding Balanced Incomplete Block (BIB) designs with homoscedastic, uncorrelated errors. The relative efficiency of BIB designs compared to BIBAC designs depends on the block size k and the autocorrelation ρ and is independent of the number of treatments. Further this relative efficiency increases with increasing k. Partially balanced incomplete block designs with autocorrelated errors are introduced using partially balanced incomplete block designs and orthogonal arrays of type I and type II.     

On optimality properties of simple block designs in the approximate design theory

Optimality properties of approximate block designs are studied under variations of (1) the class of competing designs, (2) the optimality criterion, (3) the parametric function of interest, and (4) the statistical model. The designs which are optimal turn out to be the product of their treatment and block marginals, and uniform designs when the support is specified in advance. Optimality here means uniform, universal, and simultaneous j_p-optimality. The classical balanced incomplete block designs are embedded into this approach, and shown to be simultaneously j_p-optimal for a maximal system of identifiable parameters. A geometric account of universal optimality is given which applies beyond the context of block designs.     

A new special class of peb designs

A new class of partially efficiency-balanced designs is introduced from a practical point of view. This new design includes all equireplicated incomplete block designs available in literature as special cases. The fundamental properties of the design are clarified with relation to other block designs.     

Generalized neighbor designs with block size 3

A generalized neighbor design relaxes the equality condition on the number of times two treatments as neighbors in the design. In this article, we have considered the construction of some classes of generalized neighbor designs with block size k=3 by using the method of cyclic shifts. The distinguishing feature of this construction method is that the properties of a design can easily be obtained from the sets of shifts instead of constructing the actual blocks of the design. A catalog of generalized neighbor designs with block size k=3 is compiled for v∈{5,6,…,18} treatments and for different replications. We provide the reader with a simpler method of construction, and in general the catalog that gives an open choice to the experimenter for selecting any class of neighbor designs.     

On some properties of the dual of a totally balanced block design

In this paper it is shown that the dual of a totally balanced block design with t = b, is also a totally balanced block design. It is shown that Fisher's inequality $\text{b≧t}$ for BIB designs, holds also for a totally balanced block design.     

Optimal block designs comparing treatments with a control when the errors are correlated

The efficient design of experiments for comparing a control with v new treatments when the data are dependent is investigated. We concentrate on generalized least-squares estimation for a known covariance structure. We consider block sizes k equal to 3 or 4 and approximate designs. This method may lead to exact optimal designs for some v, b, k, but usually will only indicate the structure of an efficient design for any particular v, b, k, and yield an efficiency bound, usually unattainable. The bound and the structure can then be used to investigate efficient finite designs.     

On block designs arising from rank 3 graphs

In this paper a criterion showing when the orbit of a subgraph of a given rank 3 graph forms a block design, is given. As an application several classes of block designs are derived from the triangular graph T(n) and the lattice graph L₂(n).     

On the E-optimality of complete block designs under a mixed interference model

In experiments in which the response to a treatment can be affected by other treatments, the interference model with neighbor effects is usually used. It is known that circular neighbor balanced designs (CNBDs) are universally optimal under such a model if the neighbor effects are fixed (Druilhet, 1999) or random (4 and 7). However, such designs cannot exist for every combination of design parameters. In the class of block designs with the same number of treatments as experimental units per block, a CNBD cannot exist if the number of blocks, b  , is equal to p(t−1)±1$p(t-1)\pm 1$, where p is a positive integer and t is the number of treatments. Filipiak et al. (2008) gave the structure of the left-neighboring matrix of E-optimal complete block designs with p  =1 under the model with fixed neighbor effects. The purpose of this paper is to generalize E-optimality results for designs with p∈N$p\in \mathbb{N}$ assuming random neighbor effects.     

E-optimal incomplete block designs with two distinct block sizes

Sufficient conditions are derived for the determination of E-optimal designs in the class D(v,b₁,b₂,k₁,k₂) of incomplete block designs for v treatments in b₁ blocks of size k₁ each and b₂ blocks of size k₂ each. Some constructions for E-optimal designs that satisfy the sufficient conditions obtained here are given. In particular, it is shown that E-optimal designs in D(v,b₁,b₂,k₁,k₂) can be constructed by augmenting b₂ blocks, with k₂ − k₁ extra plots each, of a BIBD(v,b = b₁ + b₂,k₁,λ) and GDD(v,b = b₁ + b₂,k₁,λ₁,λ₂). It is also shown that equireplicate E-optimal designs in D(v,b₁,b₂,k₁,k₂) can be constructed by combining disjoint blocks of BIBD(v,b,k₁,λ) and GDD(v,b,k₁,λ₁,λ₂) into larger blocks. As applications of the construction techniques, several infinite series of E-optimal designs with small block sizes differing by at most two are given. Lower bounds for the A-efficiency are derived and it is found that A-efficiency exceeds 99% for v ⩾ 10, and at least 97.5% for 5 ⩽v < 10.     

A basic lemma and the analysis of block and Kronecker product designs

In this paper the analysis of the class of block designs whose C matrix can be expressed in terms of the Kronecker product of some elementary matrices is considered. The analysis utilizes a basic result concerning the spectral decomposition of the Kronecker product of symmetric matrices in terms of the spectral decomposition of the component matrices involved in the Kronecker product. The property (A) of Kurkjian and Zelen (1963) is generalised and the analysis of generalised property (A) designs is given. It is proved that a design is balanced factorially if and only if it is a generalised property (A) design. A method of analysis of Kronecker product block designs whose component designs are equi-replicate and proper is also suggested.     

Construction of group divisible designs and rectangular designs from resolvable and almost resolvable balanced incomplete block designs

In this paper, we present a general construction of group divisible designs and rectangular designs by utilising resolvable and “almost resolvable” balanced incomplete block designs. As special cases, we obtain the following E-optimal designs: (a) Group divisible (GD) designs with λ₂=λ₁+1 and (b) Rectangular designs with 2 rows and having λ₃=λ₂−1=λ₁+1. Many of the GD designs are optimal among binary designs with regard to all type 1 criteria.     

E- and R-optimality of block designs for treatment-control comparisons

Abstract

We study optimal block designs for comparing a set of test treatments with a control treatment. We provide the class of all E-optimal approximate block designs, which is characterized by simple linear constraints. Based on this characterization, we obtain a class of E-optimal exact designs for unequal block sizes. In the studied model, we provide a statistical interpretation for wide classes of E-optimal designs. Moreover, we show that all approximate A-optimal designs and a large class of A-optimal exact designs for treatment-control comparisons are also R-optimal. This reinforces the observation that A-optimal designs perform well even for rectangular confidence regions.     

Construction of (M,S)-optimal design for block size 3

(M,S)-optimal designs are constructed for block size three when the number of treatments is of the form 6t + 3.     

On bounds for the efficiency of block designs for comparing test treatments with a control

In this paper we study the class of augmented balanced incomplete block designs, which are used for comparing a control treatment with a set of test treatments. Under the A- criterion we establish a condition that enables us to determine the most efficient augmented design and we suggest some methods to compute a lower bound for the efficiency of these designs. For 3≤k≤10, v≥k, we list the parameters of the most efficient designs with a lower bound for their efficiency or, if known, mention their optimality.     

Some MV-optimal group divisible type block designs for comparing a set of test treatments with a set of standard treatments

In this paper, we consider experimental situations in which it is desired to optimally compare t-test treatments to s standard treatments using a block design in which the experimental units are arranged in b blocks of size k. A method is given for generating an MV-optimal block design for such situations and sufficient conditions are derived which can often be used to establish the MV-optimality of reinforced group divisible designs which are often obtained using the process given.