Reduced Palm distribution generating function for a spatial point process

The generating function of a marginal distribution of the reduced Palm distribution of a spatial point process is considered. It serves as a bivariate summary function, providing more information than some other popular univariate summary functions, such as the reduced second-moment function and the nearest-neighbour distance distribution function. Simulation confirmed that the new summary function is more informative when applied to patterns that exhibit both clustering and regularity on the same scale of observation.     

Repeated sampling of spatial point distributions

A simple modification of a T-square sampling procedure for studying unmapped spatial distributions allows for the collection of several distance measurements at each randomly selected sampling location. A test of the null hypothesis of a completely random distribution of point items using these data is found to have power comparable to a related test based on T-square sampling if the number of items of data is held fixed, and to have greater power if the number of sampling locations is held fixed.     

Bias correction for parameter estimates of spatial point process models

When a spatial point process model is fitted to spatial point pattern data using standard software, the parameter estimates are typically biased. Contrary to folklore, the bias does not reflect weaknesses of the underlying mathematical methods, but is mainly due to the effects of discretization of the spatial domain. We investigate two approaches to correcting the bias: a Newton–Raphson-type correction and Richardson extrapolation. In simulation experiments, Richardson extrapolation performs best.     

On asymptotic properties of the mark variogram estimator of a marked point process

The mark variogram [Cressie, 1993. Statistics for Spatial Data. Wiley, New York] is a useful tool to analyze data from marked point processes. In this paper, we investigate the asymptotic properties of its estimator. Our main findings are that the sample mark variogram is a consistent estimator for the true mark variogram and is asymptotically normal under some mild conditions. These results hold for both the geostatistical marking case (i.e., the case where the marks and points are independent) and the non-geostatistical marking case (i.e., the case where the marks and points are dependent). As an application we develop a general test for spatial isotropy and study our methodology through a simulation study and an application to a data set on long leaf pine trees.     

Nonparametric estimation of spatial segregation in a multivariate point process: bovine tuberculosis in Cornwall, UK

Summary.  The paper is motivated by a problem in veterinary epidemiology, in which spatially referenced breakdowns of bovine tuberculosis are classified according to their genotype and year of occurrence. We develop a nonparametric method for addressing spatial segregation in the resulting multivariate spatial point process, with associated Monte Carlo tests for the null hypothesis that different genotypes are randomly intermingled and no temporal changes in spatial segregation. Our spatial segregation estimates use a kernel regression method with bandwidth selected by a multivariate cross-validated likelihood criterion.     

Information loss on the dependence parameter due to incomplete data from a one-parameter spatial gaussian process

The Fisher information loss on the dependence parameter is considered for three one-parameter Gaussian processes on a rectangular lattice when some values are not observed. Formulae are given for the general case, and simplified versions for two of the special cases. Approximations are considered, and cases with a small number of missing sites are compared.     

Optimal network design for Bayesian spatial prediction of multivariate non-Gaussian environmental data

This paper deals with the problem of increasing air pollution monitoring stations in Tehran city for efficient spatial prediction. As the data are multivariate and skewed, we introduce two multivariate skew models through developing the univariate skew Gaussian random field proposed by Zareifard and Jafari Khaledi [21 H. Zareifard and M. Jafari Khaledi, Non-Gaussian modeling of spatial data using scale mixing of a unified skew Gaussian process, J. Multivariate Anal. 114 (2013), pp. 16–28. doi: 10.1016/j.jmva.2012.07.003[Crossref], [Web of Science ®] , [Google Scholar]]. These models provide extensions of the linear model of coregionalization for non-Gaussian data. In the Bayesian framework, the optimal network design is found based on the maximum entropy criterion. A Markov chain Monte Carlo algorithm is developed to implement posterior inference. Finally, the applicability of two proposed models is demonstrated by analyzing an air pollution data set.     

A regression approach for estimating the parameters of the covariance function of a stationary spatial random process

We consider the problem of estimating the parameters of the covariance function of a stationary spatial random process. In spatial statistics, there are widely used parametric forms for the covariance functions, and various methods for estimating the parameters have been proposed in the literature. We develop a method for estimating the parameters of the covariance function that is based on a regression approach. Our method utilizes pairs of observations whose distances are closest to a value h>0$h>0$ which is chosen in a way that the estimated correlation at distance h is a predetermined value. We demonstrate the effectiveness of our procedure by simulation studies and an application to a water pH data set. Simulation studies show that our method outperforms all well-known least squares-based approaches to the variogram estimation and is comparable to the maximum likelihood estimation of the parameters of the covariance function. We also show that under a mixing condition on the random field, the proposed estimator is consistent for standard one parameter models for stationary correlation functions.     

Local linear estimate of the point at high risk: Spatial functional data case

Abstract

The purpose of the present paper is to investigate by the local linear method a nonparametric estimator of the point at high risk of scalar response variable given a functional variable when the observations are spatially dependent. The main goal is to establish the almost complete convergence with rate of this estimator under some general conditions. A practical example on the climatological data shows the usefulness of our theoretical study.     

On the maximum likelihood estimation of parameters of a spatial discrimination model

Consideration is given here to the problem of maximum likelihood estimation of parameters in a sparial discrimination model which was proposed by switzer (1980). some moments of these estimators are derived. These results extend the work of Mardia (1984) who gave expressions for these estimators without their moments.     

A Conditional Autoregressive Gaussian Process for Irregularly Spaced Multivariate Data with Application to Modelling Large Sets of Binary Data

A Gaussian conditional autoregressive (CAR) formulation is presented that permits the modelling of the spatial dependence and the dependence between multivariate random variables at irregularly spaced sites so capturing some of the modelling advantages of the geostatistical approach. The model benefits not only from the explicit availability of the full conditionals but also from the computational simplicity of the precision matrix determinant calculation using a closed form expression involving the eigenvalues of a precision matrix submatrix. The introduction of covariates into the model adds little computational complexity to the analysis and thus the method can be straightforwardly extended to regression models. The model, because of its computational simplicity, is well suited to application involving the fully Bayesian analysis of large data sets involving multivariate measurements with a spatial ordering. An extension to spatio-temporal data is also considered. Here, we demonstrate use of the model in the analysis of bivariate binary data where the observed data is modelled as the sign of the hidden CAR process. A case study involving over 450 irregularly spaced sites and the presence or absence of each of two species of rain forest trees at each site is presented; Markov chain Monte Carlo (MCMC) methods are implemented to obtain posterior distributions of all unknowns. The MCMC method works well with simulated data and the tree biodiversity data set.     

Bayesian analysis of spatial point processes in the neighbourhood of Voronoi networks

A model for an inhomogeneous Poisson process with high intensity near the edges of a Voronoi tessellation in 2D or 3D is proposed. The model is analysed in a Bayesian setting with priors on nuclei of the Voronoi tessellation and other model parameters. An MCMC algorithm is constructed to sample from the posterior, which contains information about the unobserved Voronoi tessellation and the model parameters. A major element of the MCMC algorithm is the reconstruction of the Voronoi tessellation after a proposed local change of the tessellation. A simulation study and examples of applications from biology (animal territories) and material science (alumina grain structure) are presented.     

Estimation of the intensity function of an inhomogeneous Poisson process with a change‐point

Recent work on point processes includes studying posterior convergence rates of estimating a continuous intensity function. In this article, convergence rates for estimating the intensity function and change‐point are derived for the more general case of a piecewise continuous intensity function. We study the problem of estimating the intensity function of an inhomogeneous Poisson process with a change‐point using non‐parametric Bayesian methods. An Markov Chain Monte Carlo (MCMC) algorithm is proposed to obtain estimates of the intensity function and the change‐point which is illustrated using simulation studies and applications. The Canadian Journal of Statistics 47: 604–618; 2019 © 2019 Statistical Society of Canada     

A Bayesian approach for locating change points in a compound Poisson process with application to detecting DNA copy number variations

This work examines the problem of locating changes in the distribution of a Compound Poisson Process where the variables being summed are iid normal and the number of variable follows the Poisson distribution. A Bayesian approach is developed to identify the location of significant changes in any of the parameters of the distribution, and a sliding window algorithm is used to identify multiple change points. These results can be applied in any field of study where an interest in locating changes not only in the parameter of a normally distributed data set but also in the rate of their occurrence. It has direct application to the study of DNA copy number variations in cancer research, where it is known that the distances between the genes can affect their intensity level.     

Nonparametric estimation of the mean function of a stochastic process with missing observations

In an attempt to identify similarities between methods for estimating a mean function with different types of response or observation processes, we explore a general theoretical framework for nonparametric estimation of the mean function of a response process subject to incomplete observations. Special cases of the response process include quantitative responses and discrete state processes such as survival processes, counting processes and alternating binary processes. The incomplete data are assumed to arise from a general response-independent observation process, which includes right- censoring, interval censoring, periodic observation, and mixtures of these as special cases. We explore two criteria for defining nonparametric estimators, one based on the sample mean of available data and the other inspired by the construction of Kaplan-Meier (or product-limit) estimator [J. Am. Statist. Assoc. 53 (1958) 457] for right-censored survival data. We show that under regularity conditions the estimated mean functions resulting from both criteria are consistent and converge weakly to Gaussian processes, and provide consistent estimators of their covariance functions. We then evaluate these general criteria for specific responses and observation processes, and show how they lead to familiar estimators for some response and observation processes and new estimators for others. We illustrate the latter with data from an recently completed AIDS clinical trial.     

Asymptotic approach for a renewal-reward process with a general interference of chance

ABSTRACT

In this study, a renewal-reward process with a discrete interference of chance is constructed and considered. Under weak conditions, the ergodicity of the process X(t) is proved and exact formulas for the ergodic distribution and its moments are found. Within some assumptions for the discrete interference of chance in general form, two-term asymptotic expansions for all moments of the ergodic distribution are obtained. Additionally, kurtosis coefficient, skewness coefficient, and coefficient of variation of the ergodic distribution are computed. As a special case, a semi-Markovian inventory model of type (s, S) is investigated.     

Computational aspects of the EM algorithm for spatial econometric models with missing data

Maximum likelihood (ML) estimation with spatial econometric models is a long-standing problem that finds application in several areas of economic importance. The problem is particularly challenging in the presence of missing data, since there is an implied dependence between all units, irrespective of whether they are observed or not. Out of the several approaches adopted for ML estimation in this context, that of LeSage and Pace [Models for spatially dependent missing data. J Real Estate Financ Econ. 2004;29(2):233–254] stands out as one of the most commonly used with spatial econometric models due to its ability to scale with the number of units. Here, we review their algorithm, and consider several similar alternatives that are also suitable for large datasets. We compare the methods through an extensive empirical study and conclude that, while the approximate approaches are suitable for large sampling ratios, for small sampling ratios the only reliable algorithms are those that yield exact ML or restricted ML estimates.     

Fiscal decentralization,financial efficiency and upgrading the industrial structure: an empirical analysis of a spatial heterogeneity model

From the perspective of spatial heterogeneity and using data from 281 prefecture-level cities in China over the 2003–2012 period, we empirically test the interactions and differences in the spatial effects through which fiscal decentralization and financial efficiency influence the upgrading of regional industrial structure. The results indicate that regional differences in fiscal decentralization and financial efficiency lead to significant spatial heterogeneity in upgrading the industrial structure. The interaction mechanism between fiscal decentralization and financial efficiency plays a positive role in promoting the upgrading of the regional industrial structure, which is subject to organic integration between fiscal systems and financial development. Moreover, there is significant spatial dependence in the effects of fiscal decentralization and financial efficiency on upgrading the regional industrial structure, the ‘high-lying-land’ effects and the ‘low-lying-land’ effects coexist in the spatial pattern.     

Impact of misspecified residual correlation structure on the parameter estimates in a shared spatial frailty model

In practice, survival data are often collected over geographical regions. Shared spatial frailty models have been used to model spatial variation in survival times, which are often implemented using the Bayesian Markov chain Monte Carlo method. However, this method comes at the price of slow mixing rates and heavy computational cost, which may render it impractical for data-intensive application. Alternatively, a frailty model assuming an independent and identically distributed (iid) random effect can be easily and efficiently implemented. Therefore, we used simulations to assess the bias and efficiency loss in the estimated parameters, if residual spatial correlation is present but using an iid random effect. Our simulations indicate that a shared frailty model with an iid random effect can estimate the regression coefficients reasonably well, even with residual spatial correlation present, when the percentage of censoring is not too high and the number of clusters and cluster size are not too low. Therefore, if the primary goal is to assess the covariate effects, one may choose the frailty model with an iid random effect; whereas if the goal is to predict the hazard, additional care needs to be given due to the efficiency loss in the parameter(s) for the baseline hazard.     

Modelling and classification of species abundance: a case study in the Barro Colorado Island plot

Quantifying and modelling the effect of environmental variables on the abundance of species is of great importance in plant ecology and forestry. In this paper, using a log-additive model, the effect of environmental variables on distribution of five species in the Barro Colorado Island plot is modelled. The fitted log-additive models are examined and compared with conventional log-linear models. Finally, a cluster analysis is employed to classify species into groups with similar habitat preferences.