Comparisons of the asymptotic efficiencies of two sample tests for discrete distributions

The asymptotic efficiencies are computed for several popular two sample rank tests when the underlying distributions are Poisson, binomial, discrete uniform, and negative binomial The rank tests examined include the Mann-Whitney test, the van der Waerden test, and the median test. Three methods for handling ties are discussed and compared. The computed asymptotic efficiencies apply also to the k-sample extensions of the above tests, such as the Kruskal-Wallis test, etc.     

On the power of the t-test and some rank tests when outliers may be present

The power of some rank tests, used for testing the hypothesis of shift, is found when the underlying distributions contain outliers. The outliers are assumed to occur as the result of mixing two normal distributions with common variance. A small sample case shows how the scores for the rank tests are found and the exact power is computed for each of these rank tests. A Monte Carlo study provides an estimate of the power of the usual two sample t-test.     

THE POWER AND SIZE OF NONPARAMETRIC TESTS FOR COMMON DISTRIBUTIONAL CHARACTERISTICS

This paper considers the power and size properties of some well known nonparametric linear rank tests for location and scale as well as the Kolmogorov-Smirnov omnibus test and proposed alternatives to it. Independence between some classes of linear rank tests is established facilitating their joint application. Monte Carlo study confirms the asymptotic power properties of the linear rank tests but raises concerns about their application in more general and practically relevant circumstances. It also indicates that the new omnibus tests constitute viable alternatives with superior properties to the Kolmogorov-Smirnov test in certain circumstances.     

Crossings of a height and related bank order statistics

Former results on BAHADUR efficiency of signed rank tests are carried over to the class of two-sample rank tests. It is shown that the two-sample rank tests are asymptotically optimal at alternatives far away from the hypothesis under fairly general conditions. Surprisingly, the median test appears to be optimal only in case of equal sample sizes.     

Significance levels and confidence intervals for permutation tests

A computational algorithm is given which calculates exact significance levels of a wide class of permutation tests in the one and two sample problems. This class includes the permutation test based on the means, locally most powerful permutation tests and linear rank tests. When a shift model is assumed confidence intervals can also be obtained. Approximate methods, based on asymptotic expansions, are also presented.     

Some linear and nonlinear rank tests for competing risks models

Using the methods of asymptotic decision theory asymptotically optimal for translation and scale families as well as for certian nonparmetric families. Moreover, two new classes of nonlinear rank tests are introduced. These tests are designed for detecting either “ omnibus alternatives ” or “ one sided alternatives of trend ”. Under the null hypothesis of randomness all tests are distribution - free. The asymptotic distributions of the test statistics are derived under contiguous alternatives.     

Adaptive choice of scale tests in flexible two-stage designs with applications in experimental ecology and clinical trials

In this paper, the two-sample scale problem is addressed within the rank framework which does not require to specify the underlying continuous distribution. However, since the power of a rank test depends on the underlying distribution, it would be very useful for the researcher to have some information on it in order to use the possibly most suitable test. A two-stage adaptive design is used with adaptive tests where the data from the first stage are used to compute a selector statistic to select the test statistic for stage 2. More precisely, an adaptive scale test due to Hall and Padmanabhan and its components are considered in one-stage and several adaptive and non-adaptive two-stage procedures. A simulation study shows that the two-stage test with the adaptive choice in the second stage and with Liptak combination, when it is not more powerful than the corresponding one-stage test, shows, however, a quite similar power behavior. The test procedures are illustrated using two ecological applications and a clinical trial.     

Comparison of Some Mrpp and Standard Rank Tests for Two Unequal Samples

MRPP rank tests for two subgroups of unequal size are studied in detail. Based on the Pearson criteria, appropriate Pearson curves are suggested for their approximate distributions. On the basis ot extensive simulations, empirical powers of these tests are compared among themselves and with some standard nonparametric tests for several underlying populations.     

Linear rank tests for homogeneity against ordered alternatives in anova and anocova

A unified method of constructing rank tests for homogeneity against ordered alternatives in unbalanced analysis of variance and analysis of covariance is considered. The relationship between these tests with some of the existing methods are studied. The normal theory likelihood ratio tests are also derived and the asymptotic relative efficiency comparisons, in Pitman sense, of the rank tests with respect to the likelihood ratio tests are carried out.     

Comparing the Survival of Two Groups with an Intermediate Clinical Event

Consider a subject entered on a clinicaltrial in which the major endpoint is a time metric such as deathor time to reach a well defined event. During the observationalperiod the subject may experience an intermediate clinical event.The intermediate clinical event may induce a change in the survivaldistribution. We consider models for the one and two sample problem.The model for the one sample problem enables one to test if theoccurrence of the intermediate event changed the survival distribution.This models provides a way of carrying out non-randomized clinicaltrial to determine if a therapy has benefit. The two sample problemconsiders testing if the probability distributions, with andwithout an intermediate event, are the same. Statistical testsare derived using a semi-Markov or a time dependent mixture model.Simulation studies are carried out to compare these new procedureswith the log rank, stratified log rank and landmark tests. Thenew tests appear to have uniformly greater power than these competitortests. The methods are applied to a randomized clinical trialcarried out by the Aids Clinical Trial Group (ACTG) which comparedlow versus high doses of zidovudine (AZT).     

Union-intersection rank tests for ordered alternatives in some simple linear models

The theory of locally most powerful rank tests and the union intersection principle are incorporated in the formulation of some distribution-free rank tests for ordered alternatives in some simple linear models (including the classical one-way layout as a special case). Some approximations for the null-hypothesis distributions of the test statistics ( for finite sample sizes) are considered, and the theory is supplemented by some numerical and simulation results.     

Testing order restricted hypotheses with proportional hazards

Inferences for survival curves based on right censored continuous or grouped data are studied. Testing homogeneity with an ordered restricted alternative and testing the order restriction as the null hypothesis are considered. Under a proportional hazards model, the ordering on the survival curves corresponds to an ordering on the regression coefficients. Approximate likelihood methods are obtained by applying order restricted procedures to the estimates of the regression coefficients. Ordered analogues to the log rank test which are based on the score statistics are considered also. Chi-bar-squared distributions, which have been studied extensively, are shown to provide reasonable approximations to the null distributions of these tests statistics. Using Monte Carlo techniques, the powers of these two types of tests are compared with those that are available in the literature.     

Unmasking the Trend Sought by Jonckheere-Type Tests for Right-Censored Data

Medical and epidemiological studies often involve groups of subjects associated with increasing levels of exposure to a risk factor. Survival of the groups is expected to follow the same order as the level of exposure. Formal tests for this trend fall into the regression framework if one knows what function of exposure to use as a covariate. When unknown, a linear function of exposure level is often used. Jonckheere-type tests for trend have generated continued interest largely because they do not require specification of a covariate. This paper shows that the Jonckheere-type test statistics are special cases of a generalized linear rank statistic with time-dependent covariates which unfortunately depend on the initial group sizes and censoring distributions. Using asymptotic relative efficiency calculations, the Jonckheere tests are compared to standard linear rank tests based on a linear covariate over a spectrum of shapes for the true trend.     

Simultaneous rank tests for detecting differentially expressed genes

Rank tests are known to be robust to outliers and violation of distributional assumptions. Two major issues besetting microarray data are violation of the normality assumption and contamination by outliers. In this article, we formulate the normal theory simultaneous tests and their aligned rank transformation (ART) analog for detecting differentially expressed genes. These tests are based on the least-squares estimates of the effects when data follow a linear model. Application of the two methods are then demonstrated on a real data set. To evaluate the performance of the aligned rank transform method with the corresponding normal theory method, data were simulated according to the characteristics of a real gene expression data. These simulated data are then used to compare the two methods with respect to their sensitivity to the distributional assumption and to outliers for controlling the family-wise Type I error rate, power, and false discovery rate. It is demonstrated that the ART generally possesses the robustness of validity property even for microarray data with small number of replications. Although these methods can be applied to more general designs, in this article the simulation study is carried out for a dye-swap design since this design is broadly used in cDNA microarray experiments.     

Small sample power of multivariate nonparametric tests for monotone trend

Bhattacharyya and Kioiz (1966) propose two multivariate nonparametric tests for monotone trend, one involving coordinate-wise Mann statistics and the other, coordinate-wise Spearman statistics. Dietz and Killeen (1981) propose a different test statistic based on coordinate-wise Mann statistics. The Pitman asymptotic relative efficiency of all three tests with respect to a normal theory competitor equals the cube root of the efficiency of a multivariate signed rank test with respect to Hotelling's T2. In this article, the small sample power of the nonparametric tests, the normal theory test, and a Bonferroni approach involving coordinate-wise univariate Mann or Spearman tests is examined in a simulation study. The Mann statistic of Dietz and Killeen and the Spearman statistic of Bhattacharyya and Klotz are found to perform well under both null and alternative hypotheses     

Conditional Studentized Survival Tests for Randomly Censored Models

It is shown that in the case of heterogenous censoring distributions Studentized survival tests can be carried out as conditional permutation tests given the order statistics and their censoring status. The result is based on a conditional central limit theorem for permutation statistics. It holds for linear test statistics as well as for sup-statistics. The procedure works under one of the following general circumstances for the two-sample problem: the unbalanced sample size case, highly censored data, certain non-convergent weight functions or under alternatives. For instance, the two-sample log rank test can be carried out asymptotically as a conditional test if the relative amount of uncensored observations vanishes asymptotically as long as the number of uncensored observations becomes infinite. Similar results hold whenever the sample sizes and are unbalanced in the sense that and hold.     

Most powerful tests for use in matched pair experiments when data may be censored

Four distribution-free tests are developed for use in matched pair experiments when data may be censored: a bootstrap based on estimates of the median difference, and three rerandomization tests. The latter include a globally almost most powerful (GAMP) test which uses the original data and two modified Gilbert-Gehan tests which use the ranks. Computation time is reduced by using a binary count to generate subsamples and by restricting subsampling to the uncensored pairs. In Monte Carlo simulations against normal alternatives, mixed normal alternatives, and exponential alternatives, the GAMP test is most powerful with light censoring, the rank test is most powerful with heavy censoring. The bootstrap degenerates to the sign test and is least powerful.     

Asymptotically optimal rank tests for the two-sample problem with randomly censored data

Using the methods of asymptotic decision theory asymptotically optimal rank tests are constructed in the two-sample testing problem for translation families and positive scale families under the assumption of equal censoring in both samples. The resulting tests have a simple form extending the known tests for un-censored data in a natural way. Relations to a recent proposal by Albers and Akritas are discussed.     

The Asymptotic Power Of Jonckheere-Type Tests For Ordered Alternatives

For the c -sample location problem with ordered alternatives, the test proposed by Barlow et al . (1972 p. 184) is an appropriate one under the model of normality. For non-normal data, however, there are rank tests which have higher power than the test of Barlow et al ., e.g. the Jonckheere test or so-called Jonckheere-type tests recently introduced and studied by Büning & Kössler (1996). In this paper the asymptotic power of the Jonckheere-type tests is computed by using results of Hájek (1968) which may be considered as extensions of the theorem of Chernoff & Savage (1958). Power studies via Monte Carlo simulation show that the asymptotic power values provide a good approximation to the finite ones even for moderate sample sizes.     

Monte carlo results for conditional survival tests under randomly censored data

Within a Monte Carlo study finite sample results are obtained for different generalized rank tests based on randomly censored life time data. It is pointed out that conditional tests should be applied in practice whenever drastic differences between the censoring distributions for the underlying groups do not appear. The tests are slight modifications of known permutation tests for censored data.