Geoadditive models

Summary. A study into geographical variability of reproductive health outcomes (e.g. birth weight) in Upper Cape Cod, Massachusetts, USA, benefits from geostatistical mapping or kriging . However, also observed are some continuous covariates (e.g. maternal age) that exhibit pronounced non-linear relationships with the response variable. To account for such effects properly we merge kriging with additive models to obtain what we call geoadditive models . The merging becomes effortless by expressing both as linear mixed models. The resulting mixed model representation for the geoadditive model allows for fitting and diagnosis using standard methodology and software.     

Modelling long-term pan-European population change from 1870 to 2000 by using geographical information systems

Summary.  The paper presents work that creates a geographical information system database of European census data from 1870 to 2000. The database is integrated over space and time. Spatially it consists of regional level data for most of Europe; temporally it covers every decade from 1870 to 2000. Crucially the data have been interpolated onto the administrative units that were available in 2000, thus allowing contemporary population patterns to be understood in the light of the changes that have occurred since the late 19th century. The effect of interpolation error on the resulting estimates is explored. This database will provide a framework for much future analysis on long-term Europewide demographic processes over space and time.     

A comparison of estimators of the geographical relative risk function

The geographical relative risk function is a useful tool for investigating the spatial distribution of disease based on case and control data. The most common way of estimating this function is using the ratio of bivariate kernel density estimates constructed from the locations of cases and controls, respectively. An alternative is to use a local-linear (LL) estimator of the log-relative risk function. In both cases, the choice of bandwidth is critical. In this article, we examine the relative performance of the two estimation techniques using a variety of data-driven bandwidth selection methods, including likelihood cross-validation (CV), least-squares CV, rule-of-thumb reference methods, and a new approximate plug-in (PI) bandwidth for the LL estimator. Our analysis includes the comparison of asymptotic results; a simulation study; and application of the estimators on two real data sets. Our findings suggest that the density ratio method implemented with the least-squares CV bandwidth selector is generally best, with the LL estimator with PI bandwidth being competitive in applications with strong large-scale trends but much worse in situations with elliptical clusters.     

Inference on Polychotomous Responses in Finite Populations

Abstract. A model‐based predictive estimator is proposed for the population proportions of a polychotomous response variable, based on a sample from the population and on auxiliary variables, whose values are known for the entire population. The responses for the non‐sample units are predicted using a multinomial logit model, which is a parametric function of the auxiliary variables. A bootstrap estimator is proposed for the variance of the predictive estimator, its consistency is proved and its small sample performance is compared with that of an analytical estimator. The proposed predictive estimator is compared with other available estimators, including model‐assisted ones, both in a simulation study involving different sampling designs and model mis‐specification, and using real data from an opinion survey. The results indicate that the prediction approach appears to use auxiliary information more efficiently than the model‐assisted approach.     

An investigation of the impact of various geographical scales for the specification of spatial dependence

Ecological studies are based on characteristics of groups of individuals, which are common in various disciplines including epidemiology. It is of great interest for epidemiologists to study the geographical variation of a disease by accounting for the positive spatial dependence between neighbouring areas. However, the choice of scale of the spatial correlation requires much attention. In view of a lack of studies in this area, this study aims to investigate the impact of differing definitions of geographical scales using a multilevel model. We propose a new approach – the grid-based partitions and compare it with the popular census region approach. Unexplained geographical variation is accounted for via area-specific unstructured random effects and spatially structured random effects specified as an intrinsic conditional autoregressive process. Using grid-based modelling of random effects in contrast to the census region approach, we illustrate conditions where improvements are observed in the estimation of the linear predictor, random effects, parameters, and the identification of the distribution of residual risk and the aggregate risk in a study region. The study has found that grid-based modelling is a valuable approach for spatially sparse data while the statistical local area-based and grid-based approaches perform equally well for spatially dense data.     

Order-free co-regionalized areal data models with application to multiple-disease mapping

With the ready availability of spatial databases and geographical information system software, statisticians are increasingly encountering multivariate modelling settings featuring associations of more than one type: spatial associations between data locations and associations between the variables within the locations. Although flexible modelling of multivariate point-referenced data has recently been addressed by using a linear model of co-regionalization, existing methods for multivariate areal data typically suffer from unnecessary restrictions on the covariance structure or undesirable dependence on the conditioning order of the variables. We propose a class of Bayesian hierarchical models for multivariate areal data that avoids these restrictions, permitting flexible and order-free modelling of correlations both between variables and across areal units. Our framework encompasses a rich class of multivariate conditionally autoregressive models that are computationally feasible via modern Markov chain Monte Carlo methods. We illustrate the strengths of our approach over existing models by using simulation studies and also offer a real data application involving annual lung, larynx and oesophageal cancer death-rates in Minnesota counties between 1990 and 2000.     

Combining information from multiple surveys by using regression for efficient small domain estimation

Summary.  In sample surveys of finite populations, subpopulations for which the sample size is too small for estimation of adequate precision are referred to as small domains. Demand for small domain estimates has been growing in recent years among users of survey data. We explore the possibility of enhancing the precision of domain estimators by combining comparable information collected in multiple surveys of the same population. For this, we propose a regression method of estimation that is essentially an extended calibration procedure whereby comparable domain estimates from the various surveys are calibrated to each other. We show through analytic results and an empirical study that this method may greatly improve the precision of domain estimators for the variables that are common to these surveys, as these estimators make effective use of increased sample size for the common survey items. The design-based direct estimators proposed involve only domain-specific data on the variables of interest. This is in contrast with small domain (mostly small area) indirect estimators, based on a single survey, which incorporate through modelling data that are external to the targeted small domains. The approach proposed is also highly effective in handling the closely related problem of estimation for rare population characteristics.     

Spatial robust small area estimation

The accuracy of recent applications in small area statistics in many cases highly depends on the assumed properties of the underlying models and the availability of micro information. In finite population sampling, small sample sizes may increase the sensitivity of the modeling with respect to single units. In these cases, area-specific sample sizes tend to be small such that normal assumptions, even of area means, seem to be violated. Hence, applying robust estimation methods is expected to yield more reliable results. In general, two robust small area methods are applied, the robust EBLUP and the M-quantile method. Additionally, the use of adequate auxiliary information may further increase the accuracy of the estimates. In prediction based approaches where information is needed on universe level, in general, only few variables are available which can be used for modeling. In addition to variables from the dataset, in many cases further information may be available, e.g. geographical information which could indicate spatial dependencies between neighboring areas. This spatial information can be included in the modeling using spatially correlated area effects. Within the paper the classical robust EBLUP is extended to cover spatial area effects via a simultaneous autoregressive model. The performance of the different estimators are compared in a model-based simulation study.     

A calibration-based approach to sensitive data: a simulation study

In this paper, we discuss the use of auxiliary information to estimate the population mean of a sensitive variable when data are perturbed by means of three scrambled response devices, namely the additive, the multiplicative and the mixed model. Emphasis is given to the calibration approach, and the behavior of different estimators is investigated through simulated and real data. It is shown that the use of auxiliary information can considerably improve the efficiency of the estimates without jeopardizing respondent privacy.     

On Prediction for Correlated Domains in Longitudinal Surveys

In the survey sampling estimation or prediction of both population’s and subopulation’s (domain’s) characteristics is one of the key issues. In the case of the estimation or prediction of domain’s characteristics one of the problems is looking for additional sources of information that can be used to increase the accuracy of estimators or predictors. One of these sources may be spatial and temporal autocorrelation. Due to the mean squared error (MSE) estimation, the standard assumption is that random variables are independent for population elements from different domains. If the assumption is taken into account, spatial correlation may be assumed only inside domains. In the paper, we assume some special case of the linear mixed model with two random components that obey assumptions of the first-order spatial autoregressive model SAR(1) (but inside groups of domains instead of domains) and first-order temporal autoregressive model AR(1). Based on the model, the empirical best linear unbiased predictor will be proposed together with an estimator of its MSE taking the spatial correlation between domains into account.     

Hierarchical Bayes estimation of spatial statistics for rates

The U.S. Bureau of Labour Statistics publishes monthly unemployment rate estimates for its 50 states, the District of Columbia, and all counties, under Current Population Survey. However, the unemployment rate estimates for some states are unreliable due to low sample sizes in these states. Datta et al. (1999) proposed a hierarchical Bayes (HB) method using a time series generalization of a widely used cross-sectional model in small-area estimation. However, the geographical variation is also likely to be important. To have an efficient model, a comprehensive mixed normal model that accounts for the spatial and temporal effects is considered. A HB approach using Markov chain Monte Carlo is used for the analysis of the U.S. state-level unemployment rate estimates for January 2004-December 2007. The sensitivity of such type of analysis to prior assumptions in the Gaussian context is also studied.     

Non-stationary partition modeling of geostatistical data for malaria risk mapping

The most common assumption in geostatistical modeling of malaria is stationarity, that is spatial correlation is a function of the separation vector between locations. However, local factors (environmental or human-related activities) may influence geographical dependence in malaria transmission differently at different locations, introducing non-stationarity. Ignoring this characteristic in malaria spatial modeling may lead to inaccurate estimates of the standard errors for both the covariate effects and the predictions. In this paper, a model based on random Voronoi tessellation that takes into account non-stationarity was developed. In particular, the spatial domain was partitioned into sub-regions (tiles), a stationary spatial process was assumed within each tile and between-tile correlation was taken into account. The number and configuration of the sub-regions are treated as random parameters in the model and inference is made using reversible jump Markov chain Monte Carlo simulation. This methodology was applied to analyze malaria survey data from Mali and to produce a country-level smooth map of malaria risk.     

Structural Equation Models for Dealing With Spatial Confounding

In regression analyses of spatially structured data, it is common practice to introduce spatially correlated random effects into the regression model to reduce or even avoid unobserved variable bias in the estimation of other covariate effects. If besides the response the covariates are also spatially correlated, the spatial effects may confound the effect of the covariates or vice versa. In this case, the model fails to identify the true covariate effect due to multicollinearity. For highly collinear continuous covariates, path analysis and structural equation modeling techniques prove to be helpful to disentangle direct covariate effects from indirect covariate effects arising from correlation with other variables. This work discusses the applicability of these techniques in regression setups, where spatial and covariate effects coincide at least partly and classical geoadditive models fail to separate these effects. Supplementary materials for this article are available online.     

Robust estimation of a dynamic spatio-temporal model with structural change

We postulate a dynamic spatio-temporal model with constant covariate effect but with varying spatial effect over time and varying temporal effect across locations. To mitigate the effect of temporary structural change, the model can be estimated using the backfitting algorithm embedded with forward search algorithm and bootstrap. A simulation study is designed to evaluate structural optimality of the model with the estimation procedure. The fitted model exhibit superior predictive ability relative to the linear model. The proposed algorithm also consistently produced lower relative bias and standard errors for the spatial parameter estimates. While additional neighbourhoods do not necessarily improve predictive ability of the model, it trims down relative bias on the parameter estimates, specially for spatial parameter. Location of the temporary structural change along with the degree of structural change contributes to lower relative bias of parameter estimates and in better predictive ability of the model. The estimation procedure is able to produce parameter estimates that are robust to the occurrence of temporary structural change.     

Exponential-Bound Property of Estimators and Variable Selection in Generalized Additive Models

In this article, utilizing a scale mixture of skew-normal distribution in which mixing random variable is assumed to follow a mixture model with varying weights for each observation, we introduce a generalization of skew-normal linear regression model with the aim to provide resistant results. This model, which also includes the skew-slash distribution in a particular case, allows us to accommodate and detect outlying observations under the skew-normal linear regression model. Inferences about the model are carried out through the empirical Bayes approach. The conditions for propriety of the posterior and for existence of posterior moments are given under the standard noninformative priors for regression and scale parameters as well as proper prior for skewness parameter. Then, for Bayesian inference, a Markov chain Monte Carlo method is described. Since posterior results depend on the prior hyperparameters, we estimate them adopting the empirical Bayes method as well as using a Monte Carlo EM algorithm. Furthermore, to identify possible outliers, we also apply the Bayes factor obtained through the generalized Savage-Dickey density ratio. Examining the proposed approach on simulated instance and real data, it is found to provide not only satisfactory parameter estimates rather allow identifying outliers favorably.     

Statistical inference and visualization in scale-space for spatially dependent images

SiZer (SIgnificant ZERo crossing of the derivatives) is a graphical scale-space visualization tool that allows for statistical inferences. In this paper we develop a spatial SiZer for finding significant features and conducting goodness-of-fit tests for spatially dependent images. The spatial SiZer utilizes a family of kernel estimates of the image and provides not only exploratory data analysis but also statistical inference with spatial correlation taken into account. It is also capable of comparing the observed image with a specific null model being tested by adjusting the statistical inference using an assumed covariance structure. Pixel locations having statistically significant differences between the image and a given null model are highlighted by arrows. The spatial SiZer is compared with the existing independent SiZer via the analysis of simulated data with and without signal on both planar and spherical domains. We apply the spatial SiZer method to the decadal temperature change over some regions of the Earth.     

Modelling the role of variables in model-based cluster analysis

In the framework of cluster analysis based on Gaussian mixture models, it is usually assumed that all the variables provide information about the clustering of the sample units. Several variable selection procedures are available in order to detect the structure of interest for the clustering when this structure is contained in a variable sub-vector. Currently, in these procedures a variable is assumed to play one of (up to) three roles: (1) informative, (2) uninformative and correlated with some informative variables, (3) uninformative and uncorrelated with any informative variable. A more general approach for modelling the role of a variable is proposed by taking into account the possibility that the variable vector provides information about more than one structure of interest for the clustering. This approach is developed by assuming that such information is given by non-overlapped and possibly correlated sub-vectors of variables; it is also assumed that the model for the variable vector is equal to a product of conditionally independent Gaussian mixture models (one for each variable sub-vector). Details about model identifiability, parameter estimation and model selection are provided. The usefulness and effectiveness of the described methodology are illustrated using simulated and real datasets.     

On confidence intervals for semiparametric expectile regression

In regression scenarios there is a growing demand for information on the conditional distribution of the response beyond the mean. In this scenario quantile regression is an established method of tail analysis. It is well understood in terms of asymptotic properties and estimation quality. Another way to look at the tail of a distribution is via expectiles. They provide a valuable alternative since they come with a combination of preferable attributes. The easy weighted least squares estimation of expectiles and the quadratic penalties often used in flexible regression models are natural partners. Also, in a similar way as quantiles can be seen as a generalisation of median regression, expectiles offer a generalisation of mean regression. In addition to regression estimates, confidence intervals are essential for interpretational purposes and to assess the variability of the estimate, but there is a lack of knowledge regarding the asymptotic properties of a semiparametric expectile regression estimate. Therefore confidence intervals for expectiles based on an asymptotic normal distribution are introduced. Their properties are investigated by a simulation study and compared to a boostrap-based gold standard method. Finally the introduced confidence intervals help to evaluate a geoadditive expectile regression model on childhood malnutrition data from India.     

Generalised Linear Models Incorporating Population Level Information: An Empirical Likelihood Based Approach

In many situations information from a sample of individuals can be supplemented by population level information on the relationship between a dependent variable and explanatory variables. Inclusion of the population level information can reduce bias and increase the efficiency of the parameter estimates.Population level information can be incorporated via constraints on functions of the model parameters. In general the constraints are nonlinear making the task of maximum likelihood estimation harder. In this paper we develop an alternative approach exploiting the notion of an empirical likelihood. It is shown that within the framework of generalised linear models, the population level information corresponds to linear constraints, which are comparatively easy to handle. We provide a two-step algorithm that produces parameter estimates using only unconstrained estimation. We also provide computable expressions for the standard errors. We give an application to demographic hazard modelling by combining panel survey data with birth registration data to estimate annual birth probabilities by parity.     

Focused Information Criterion for Capture–Recapture Models for Closed Populations

Abstract. We propose a criterion for selecting a capture–recapture model for closed populations, which follows the basic idea of the focused information criterion (FIC) of Claeskens and Hjort. The proposed criterion aims at selecting the model which, among the available models, leads to the smallest mean‐squared error (MSE) of the resulting estimator of the population size and is based on an index which, up to a constant term, is equal to the asymptotic MSE of the estimator. Two alternative approaches to estimate this FIC index are proposed. We also deal with multimodel inference; in this case, the population size is estimated by using a weighted average of the estimates coming from different models, with weights chosen so as to minimize the MSE of the resulting estimator. The proposed model selection approach is compared with more common approaches through a series of simulations. It is also illustrated by an application based on a dataset coming from a live‐trapping experiment.