Factorial experimentation in second-order Latin cubes

A Second-order Latin cube of size n x n x n can be used as the design for an experiment in three space dimensions, with the three sets of layers used as three sets of blocks. The n2 treatments are then orthogonal to the main effects X, Y and Z of the blocking systems. Particular interest attaches to second-order Latin cubes whose treatments are an n x n factorial set, with the main effects A and B of the treatment factors orthogonal to the interactions XY, XZ and YZbetween pairs of blocking systems. This note describes such designs where components of the interaction AB are each totally confounded with one of XY, XZ and YZ. Cubes with n = 4 are then described where components of A, B and AB are each partially confounded. Finally, a defective design with n = 4 is described, to illustrate the need for care in composing designs for three dimensions.     

Balanced incomplete Latin square designs

Latin squares have been widely used to design an experiment where the blocking factors and treatment factors have the same number of levels. For some experiments, the size of blocks may be less than the number of treatments. Since not all the treatments can be compared within each block, a new class of designs called balanced incomplete Latin squares (BILS) is proposed. A general method for constructing BILS is proposed by an intelligent selection of certain cells from a complete Latin square via orthogonal Latin squares. The optimality of the proposed BILS designs is investigated. It is shown that the proposed transversal BILS designs are asymptotically optimal for all the row, column and treatment effects. The relative efficiencies of a delete-one-transversal BILS design with respect to the optimal designs for both cases are also derived; it is shown to be close to 100%, as the order becomes large.     

t-Latinized Designs

A variety trial sometimes requires a resolvable block design in which the replicates are set out next to each other. The long blocks running through the replicates are then of interest. A t -latinized design is one in which groups of these t long blocks are binary. In this paper examples of such designs are given. It is shown that the algorithm described by John & Whitaker (1993) can be used to construct designs with high average efficiency factors. Upper bounds on these efficiency factors are also derived.     

Orthogonal sets of balanced incomplete block designs with nested rows and column

Known series of balanced incomplete block designs with nested rows and columns are used to find orthogonal sets of these designs, producing main effects plans in nested rows and columns. Two infinite series are so constructed and shown to be universally optimum for the analysis with recovery of row and column information, a benefit produced by the additional higher strata orthogonality they enjoy. One of these series achieves orthogonality with just v − 1 replicates of v treatments, fewer than required by Latin squares.     

Plans for blocking and fractions of nested cube designs

Plans for implementing nested cube designs invoiving 3 to 5 factors within moderate sized blocks are eveloped. Fractionsc of 1/2 and 1/4 replicates of components of the generic design are used. Suggestions for data analysis are offered.     

Designs for two-colour microarray experiments

Summary.  Designs for two-colour microarray experiments can be viewed as block designs with two treatments per block. Explicit formulae for the A- and D-criteria are given for the case that the number of blocks is equal to the number of treatments. These show that the A- and D-optimality criteria conflict badly if there are 10 or more treatments. A similar analysis shows that designs with one or two extra blocks perform very much better, but again there is a conflict between the two optimality criteria for moderately large numbers of treatments. It is shown that this problem can be avoided by slightly increasing the number of blocks. The two colours that are used in each block effectively turn the block design into a row–column design. There is no need to use a design in which every treatment has each colour equally often: rather, an efficient row–column design should be used. For odd replication, it is recommended that the row–column design should be based on a bipartite graph, and it is proved that the optimal such design corresponds to an optimal block design for half the number of treatments. Efficient row–column designs are given for replications 3–6. It is shown how to adapt them for experiments in which some treatments have replication only 2.     

Minimal neighbor designs in circular blocks of unequal sizes

Neighbor designs have their own importance in the experiments to remove the neighbor effects where the performance of a treatment is affected by the treatments applied to its adjacent plots. If each pair of distinct treatments appears exactly once as neighbors, neighbor designs are called minimal. Most of the neighbor designs require a large number of blocks of equal sizes. In this situation minimal neighbor designs in unequal block sizes are preferred to reduce the experimental material. In this article some series are presented to construct minimal neighbor designs in circular blocks of unequal sizes.     

PARTIALLY EQUINEIGHBOURED DESIGNS

This paper presents further results on a class of designs called equineighboured designs, ED. These designs are intended for field and related experiments, especially whenever there is evidence that observations in the same block are correlated. An ED has the property that every unordered pair of treatments occurs as nearest neighbours equally frequently at each level. Ipinyomi (1986) has defined and shown that ED are balanced designs when neighbouring observations are correlated. He has also presented ED as a continuation of the development of optimal block designs. An ED would often require many times the number of experimental materials needed for the construction of an ordinary balanced incomplete block, BIB, design for the same number of treatments and block sizes. Thus for a relatively large number of treatments and block sizes the required minimum number of blocks may be excessively large for practical use of ED. In this paper we shall define and examine partially equineighboured designs with n concurrences, PED (n), as alternatives where ED are practically unachievable. Particular attention will be given to designs with smaller numbers of blocks and for which only as little balance as possible may be lost.     

ON RESOLVABLE INCOMPLETE BLOCK DESIGNS1

A method of constructing resolvable incomplete block designs for v(=ks, 2 ≤ k ≤ s - 1) treatments in blocks of size k using mutually orthogonal Latin squares is proposed. It has been seen in particular that when the number of replications is s — 1 (or s), which is feasible if s is a prime or a prime power, the method gives PBIB (3) (or semi-regular GD) designs. The analysis of such designs has also been discussed.     

Optimal partially balanced nested row-column designs

A partially balanced nested row-column design, referred to as PBNRC, is defined as an arrangement of v treatments in b p × q blocks for which, with the convention that p q, the information matrix for the estimation of treatment parameters is equal to that of the column component design which is itself a partially balanced incomplete block design. In this paper, previously known optimal incomplete block designs, and row-column and nested row-column designs are utilized to develop some methods of constructing optimal PBNRC designs. In particular, it is shown that an optimal group divisible PBNRC design for v = mn kn treatments in p × q blocks can be constructed whenever a balanced incomplete block design for m treatments in blocks of size k each and a group divisible PBNRC design for kn treatments in p × q blocks exist. A simple sufficient condition is given under which a group divisible PBNRC is Ψ_f-better for all f> 0 than the corresponding balanced nested row-column designs having binary blocks. It is also shown that the construction techniques developed particularly for group divisible designs can be generalized to obtain PBNRC designs based on rectangular association schemes.     

Connectedness of complete block designs under an interference model

We consider an experiment with fixed number of blocks, in which a response to a treatment can be affected by treatments from neighboring units. For such experiment the interference model with neighbor effects is studied. Under this model we study connectedness of binary complete block designs. Assuming the circular interference model with left-neighbor effects we give the condition for minimal number of blocks necessary to obtain connected design. For a specified class of binary, complete block designs, we show that all designs are connected. Further we present the sufficient and necessary conditions of connectedness of designs with arbitrary, fixed number of blocks.     

Some methods for constructing efficiency-balanced block designs

Three methods are presented for constructing connected efficiency-balanced block designs from other block designs with the same properties. The resulting designs differ from the original ones in the number of blocks and/or in the number of experimental units and their arrangement, while the number of treatments remains unaltered. Some remarks on the proposed methods of construction refer also to variance-balanced block designs.     

Saturated designs for multivariate cubic regression

This paper deals with the problem of finding saturated designs for multivariate cubic regression on a cube which are nearly D-optimal. A finite class of designs is presented for the k dimensional cube having the property that the sequence of the best designs in this class for each k is asymptotically efficient as k increases. A method for constructing good designs in this class is discussed and the construction is carried out for 1?k?8. These numerical results are presented in the last section of the paper.     

Design two-level factorial experiments in blocks of size four

Recently, many researchers have devoted themselves to the investigation on the number of replicates needed for experiments in blocks of size two. In practice, experiments in blocks of size four might be more useful than those in blocks of size two. To estimate the main effects and two-factor interactions from a two-level factorial experiment in blocks, we might need many replicates. This article investigates designs with the least number of replicates for factorial experiments in blocks of size four. The methods to obtain such designs are presented.     

Some Classes of Binary Block Neighbor Designs

Neighbor designs are useful to neutralize the neighbor effects. In this paper two classes of these designs are constructed in circular binary blocks of size 4, 8, …, 24. First class consists of six infinite series of nearest neighbor designs in which each pair of distinct treatments appears once as neighbors. Second class also deals with six infinite series of these designs in which each pair of distinct treatments appears twice as neighbors. A catalog of nearest neighbor designs is also compiled in circular binary blocks for odd number of treatments from 23 to 99.     

General upper bound for the number of blocks having a given number of treatments common with a given block

The purpose of this paper is systematically to derive the general upper bound for the number of blocks having a given number of treatments common with a given block of certain incomplete block designs. The approach adopted here is based on the spectral decomposition of N′N for the incidence matrix N of a design, where N' is the transpose of the matrix N. This approach will lead us to upper bounds for incomplete block designs, in particular for a large number of partially balanced incomplete block (PBIB) designs, which are not covered with the standard approach (Shah 1964, 1966), Kapadia (1966)) of using well known relations between blocks of the designs and their association schemes. Several results concerning block structure of block designs are also derived from the main theorem. Finally, further generalizations of the main theorem are discussed with some illustrations.     

Resolvable row–column designs

This paper discusses resolvable row-column designs for v treatments arranged in b blocks each comprising pq units further grouped into p rows and q columns. A resolvable row-column design has v =pqs treatments set out in r groups of s blocks. Each rectangular block has p rows and q columns.     

Equineighboured balanced nested row-column designs

This paper presents equineighboured balanced nested row-column designs for v treatments arranged in b blocks each comprising pq units further grouped into p rows and q columns. These are two-dimensional designs with the property that all pairs of treatments are neighbours equally frequently at all levels in both rows and columns. Methods of construction are given both for designs based on Latin squares and those where pq≤v. Cyclic equineighboured designs are defined and tabulated for 5≤v≤10, p≤3, q≤5, where r=bpq/v is the number of replications of each treatment.     

Some adjusted orthogonal,variance balanced,multidimensional block designs

A multidimensional block design (MBD) is an experimental design with d > 1 blocking criteria geometrically represented as a d-dimensional lattice with treatment varieties assigned to some or all nodes of the lattice. Intrablock analysis of variance tables for some special classes of two- and three-dimensional block designs with some empty nodes are given. Design plans and efficiencies for 31 two-dimensional designs, each universally optimal in defined classes of designs, and 7 three-dimensional designs, each nearly optimal in defined classes of designs, are listed in the appendices. A need for such designs is apparent when the blocking criteria are implemented successively and empty nodes do not represent wasted experimental units.     

Some sufficient conditions for the type 1 optimality of block designs

In this paper, we investigate the problem of determining block designs which are optimal under type 1 optimality criteria within various classes of designs having υ treatments arranged in b blocks of size k. The solutions to two optimization problems are given which are related to a general result obtained by Cheng (1978) and which are useful in this investigation. As one application of the solutions obtained, the definition of a regular graph design given in Mitchell and John (1977) is extended to that of a semi-regular graph design and some sufficient conditions are derived for the existence of a semi-regular graph design which is optimal under a given type 1 criterion. A result is also given which shows how the sufficient conditions derived can be used to establish the optimality under a specific type 1 criterion of some particular types of semi- regular graph designs having both equal and unequal numbers of replicates. Finally,some sufficient conditions are obtained for the dual of an A- or D-optimal design to be A- or D-optimal within an appropriate class of dual designs.