Reml and best linear unbiased prediction in state space models

This article takes a hierarchical model approach to the estimation of state space models with diffuse initial conditions. An initial state is said to be diffuse when it cannot be assigned a proper prior distribution. In state space models this occurs either when fixed effects are present or when modelling nonstationarity in the state transition equation. Whereas much of the literature views diffuse states as an initialization problem, we follow the approach of Sallas and Harville (1981,1988) and incorporate diffuse initial conditions via noninformative prior distributions into hierarchical linear models. We apply existing results to derive the restricted loglike-lihood and appropriate modifications to the standard Kalman filter and smoother. Our approach results in a better understanding of De Jong's (1991) contributions. This article also shows how to adjust the standard Kalman filter, the fixed inter- val smoother and the state space model forecasting recursions, together with their mean square errors, for he presence of diffuse components. Using a hierarchical model approach it is shown that the estimates obtained are Best Linear Unbiased Predictors (BLUP).     

Nonparametric regression estimates with censored data based on block thresholding method

Here we consider wavelet-based identification and estimation of a censored nonparametric regression model via block thresholding methods and investigate their asymptotic convergence rates. We show that these estimators, based on block thresholding of empirical wavelet coefficients, achieve optimal convergence rates over a large range of Besov function classes, and in particular enjoy those rates without the extraneous logarithmic penalties that are usually suffered by term-by-term thresholding methods. This work is extension of results in Li et al. (2008). The performance of proposed estimator is investigated by a numerical study.     

A natural conjugate prior for the nonhomogeneous poisson process with an exponential intensity function

This article presents a natural conjugate prior for the nonhomogeneous Poisson process (NHPP) with an exponential intensity function, for modeling the failure rate of repairable systems. The behavior of the conjugate prior distribution with respect to its parameters is studied, and the use of this prior in Bayesian estimation is compared to two other estimation approaches (the use of independent prior distributions, and the bivariate normal distribution). The use of the conjugate prior proposed here facilitates Bayesian statistical analysis of aging. In particular, the proposed prior allows us to explicitly account for dependence between the initial failure rate and the aging rate. This is a significant improvement over the assumptions made in most prior work (either the assumption that the aging rate is known, or the assumption that the initial failure rate and the aging rate are independent). Monte Carlo simulation shows that Bayesian estimation using the proposed prior generally performs at least as well as Bayesian estimation using independent priors for the initial failure rate and the aging rate,except in the case where the prior distribution underestimates both the initial failure rate and the aging rate.     

线性规划中的灵敏度分析

考虑了线性规划模型中的灵敏度分析，解决了当约束条件减少时，最优解如何变化的问题。     

Two ways of modelling overdispersion in non-normal data

For non-normal data assumed to have distributions, such as the Poisson distribution, which have an a priori dispersion parameter, there are two ways of modelling overdispersion: by a quasi-likelihood approach or with a random-effect model. The two approaches yield different variance functions for the response, which may be distinguishable if adequate data are available. The epilepsy data of Thall and Vail and the fabric data of Bissell are used to exemplify the ideas.     

Detecting homogeneous segments in DNA sequences by using hidden Markov models

In recent years there has been a rapid growth in the amount of DNA being sequenced and in its availability through genetic databases. Statistical techniques which identify structure within these sequences can be of considerable assistance to molecular biologists particularly when they incorporate the discrete nature of changes caused by evolutionary processes. This paper focuses on the detection of homogeneous segments within heterogeneous DNA sequences. In particular, we study an intron from the chimpanzee α-fetoprotein gene; this protein plays an important role in the embryonic development of mammals. We present a Bayesian solution to this segmentation problem using a hidden Markov model implemented by Markov chain Monte Carlo methods. We consider the important practical problem of specifying informative prior knowledge about sequences of this type. Two Gibbs sampling algorithms are contrasted and the sensitivity of the analysis to the prior specification is investigated. Model selection and possible ways to overcome the label switching problem are also addressed. Our analysis of intron 7 identifies three distinct homogeneous segment types, two of which occur in more than one region, and one of which is reversible.     

Estimation of relaxation time distributions in magnetic resonance imaging

Magnetic resonance imaging techniques can be used to measure some biophysical properties of tissue. In this context, the T₂ relaxation time is an important parameter for soft‐tissue contrast. The authors develop a new technique to estimate the integral of the distribution of T₂ relaxation time without imposing any constraint other than the monotonicity of the underlying cumulative relaxation time distribution. They explore the properties of the estimation and its applications for the analysis of breast tissue data. As they show, an extension of linear discriminant analysis is found to distinguish well between two classes of breast tissue.     

Smoothing for discrete-valued time series

We deal with smoothed estimators for conditional probability functions of discrete-valued time series { Y_t } under two different settings. When the conditional distribution of Y_t given its lagged values falls in a parametric family and depends on exogenous random variables, a smoothed maximum (partial) likelihood estimator for the unknown parameter is proposed. While there is no prior information on the distribution, various nonparametric estimation methods have been compared and the adjusted Nadaraya–Watson estimator stands out as it shares the advantages of both Nadaraya–Watson and local linear regression estimators. The asymptotic normality of the estimators proposed has been established in the manner of sparse asymptotics, which shows that the smoothed methods proposed outperform their conventional, unsmoothed, parametric counterparts under very mild conditions. Simulation results lend further support to this assertion. Finally, the new method is illustrated via a real data set concerning the relationship between the number of daily hospital admissions and the levels of pollutants in Hong Kong in 1994–1995. An ad hoc model selection procedure based on a local Akaike information criterion is proposed to select the significant pollutant indices.     

Generalized integer-valued random coefficient for a first order structure autoregressive (RCINAR) process

A random coefficient autoregressive process for count data based on a generalized thinning operator is presented. Existence and weak stationarity conditions for these models are established. For the particular case of the (generalized) binomial thinning, it is proved that the necessary and sufficient conditions for weak stationarity are the same as those for continuous-valued AR(1) processes. These kinds of processes are appropriate for modelling non-linear integer-valued time series. They allow for over-dispersion and are appropriate when including covariates. Model parameters estimators are calculated and their properties studied analytically and/or through simulation.     

On the asymptotic distribution of Cook's distance in logistic regression models

It sometimes occurs that one or more components of the data exert a disproportionate influence on the model estimation. We need a reliable tool for identifying such troublesome cases in order to decide either eliminate from the sample, when the data collect was badly realized, or otherwise take care on the use of the model because the results could be affected by such components. Since a measure for detecting influential cases in linear regression setting was proposed by Cook [Detection of influential observations in linear regression, Technometrics 19 (1977), pp. 15–18.], apart from the same measure for other models, several new measures have been suggested as single-case diagnostics. For most of them some cutoff values have been recommended (see [D.A. Belsley, E. Kuh, and R.E. Welsch, Regression Diagnostics: Identifying Influential Data and Sources of Collinearity, 2nd ed., John Wiley & Sons, New York, Chichester, Brisban, (2004).], for instance), however the lack of a quantile type cutoff for Cook's statistics has induced the analyst to deal only with index plots as worthy diagnostic tools. Focussed on logistic regression, the aim of this paper is to provide the asymptotic distribution of Cook's distance in order to look for a meaningful cutoff point for detecting influential and leverage observations.