Tree health mapping with multispectral remote sensing data at UC Davis, California

Tree health is a critical parameter for evaluating urban ecosystem health and sustainability. Traditionally, this parameter has been derived from field surveys. We used multispectral remote sensing data and GIS techniques to determine tree health at the University of California, Davis. The study area (363 ha) contained 8,962 trees of 215 species. Tree health conditions were mapped for each physiognomic type at two scales: pixel and whole tree. At the pixel scale, each tree pixel within the tree crown was classified as either healthy or unhealthy based on vegetation index values. At the whole tree scale, raster based statistical analysis was used to calculate tree health index which is the ratio of healthy pixels to entire tree pixels within the tree crown. The tree was classified as healthy if the index was greater than 70%. Accuracy was checked against a random sample of 1,186 trees. At the whole tree level, 86% of campus trees were classified as healthy with 88% mapping accuracy. At the pixel level, 86% of the campus tree cover was classified as healthy. This tree health evaluation approach allows managers to identify the location of unhealthy trees for further diagnosis and treatment. It can be used to track the spread of disease and monitor seasonal or annual changes in tree health. Also, it provides tree health information that is fundamental to modeling and analysis of the environmental, social, and economic services produced by urban forests.     

Model-based confidence bands for survival functions

This paper focuses on a novel method of developing one-sample confidence bands for survival functions from right censored data. The approach is model-based, relying on a parametric model for the conditional expectation of the censoring indicator given the observed minimum, and derives its strength from easy access to a good-fitting model among a plethora of choices available for binary response data. The substantive methodological contribution is in exploiting a semiparametric estimator of the survival function to produce improved simultaneous confidence bands. To obtain critical values for computing the confidence bands, a two-stage bootstrap approach that combines the classical bootstrap with the more recent model-based regeneration of censoring indicators is proposed and a justification of its asymptotic validity is also provided. Several different confidence bands are studied using the proposed approach. Numerical studies, including robustness of the proposed bands to misspecification, are carried out to check efficacy. The method is illustrated using two lung cancer data sets.     

Adaptive Gaussian Markov random fields with applications in human brain mapping

Summary.  Functional magnetic resonance imaging has become a standard technology in human brain mapping. Analyses of the massive spatiotemporal functional magnetic resonance imaging data sets often focus on parametric or non-parametric modelling of the temporal component, whereas spatial smoothing is based on Gaussian kernels or random fields. A weakness of Gaussian spatial smoothing is underestimation of activation peaks or blurring of high curvature transitions between activated and non-activated regions of the brain. To improve spatial adaptivity, we introduce a class of inhomogeneous Markov random fields with stochastic interaction weights in a space-varying coefficient model. For given weights, the random field is conditionally Gaussian, but marginally it is non-Gaussian. Fully Bayesian inference, including estimation of weights and variance parameters, can be carried out through efficient Markov chain Monte Carlo simulation. Although motivated by the analysis of functional magnetic resonance imaging data, the methodological development is general and can also be used for spatial smoothing and regression analysis of areal data on irregular lattices. An application to stylized artificial data and to real functional magnetic resonance imaging data from a visual stimulation experiment demonstrates the performance of our approach in comparison with Gaussian and robustified non-Gaussian Markov random-field models.     

An application of cartographic area interpolation to German administrative data

In many situations the applied researcher wishes to combine different data sources without knowing the exact link and merging rule. This paper considers different cartographic interpolation methods for interpolating attributes from German employment office districts to German counties and vice versa. In particular, we apply dasymetric weighting as an alternative to simple area weighting, both of which are based on estimated intersection areas. We also present conditions under which the choice of interpolation method does not matter and confirm the theoretical results with a simulation study. Our application to German administrative data suggests robustness of estimation results of interpolated attributes with respect to the choice of interpolation method. We provide weighting matrices for regional data sources of the two largest German data producers.     

Methods for spatial and temporal land use and land cover assessment for urban ecosystems and application in the greater Baltimore-Chesapeake region

Understanding contemporary urban landscapes requires multiple sets of spatially and temporally compatible data that can integrate historical land use patterns and disturbances to land cover. This paper presents three principal methods: (1) core analysis; (2) historic mapping; and (3) gradient analysis, to link spatial and temporal data for urban ecosystems and applies their use in the Baltimore-Chesapeake region. Paleoecological evidence derived from the geochronology of sediment cores provides data on long-term as well as recent changes in vegetative land cover. This information, combined with contemporary vegetation maps, provides a baseline for conducting trend analyses to evaluate urbanization of the landscape. A 200-year historical land use database created from historical maps, census data, and remotely sensed data provides a spatial framework for investigating human impacts on the region. A geographic information system (GIS) integrates core analyses with historic data on land use change to yield a comprehensive land use and land cover framework and rates of change. These data resources establish the regional foundation for investigating the ecological components of an urban ecosystem. Urban-rural gradient analyses and patch analyses are proposed as the most appropriate methods for studying the urban ecosystem as they link ecological and social patterns and processes for varying degrees of urbanization.     

云南省地质灾害的发育特征及防治对策

受自然条件的影响和制约,云南成为我国受地质灾害危害较重的省份之一.地质灾害的频发,严重威胁着人民群众的生命财产安全,制约着我省经济、社会的发展.如何加强地质灾害防治工作,提高防治效果,不仅是保障人民群众生命财产安全的迫切要求,也是实现全面小康,构建"和谐云南"的重要举措.文章在对我省地质灾害发育的特征、当前地质灾害防治工作中存在的主要问题进行分析的基础上,提出了加强地质灾害防治的对策建议.     

Disequilibrium multi-dividing ontology learning algorithm

As an effective tool for data storage, processing, and computing, ontology has been used in many fields of computer science and information technology. By means of its powerful performance on semantic query and knowledge extraction, domain ontology has been built on various disciplines such as biology, pharmaceutics, geography, chemistry, etc. and been smoothly employed for their engineering applications. In these ontology applications, we aim to get an optimal ontology function which maps each ontology to a real number and then determine the similarity between concepts by the distance of their corresponding real numbers. In former ontology learning approaches, all the instances in the training sample have equal status in the learning process. In this article, we present the disequilibrium multi-dividing ontology algorithm in which the important ontology data will be highlighted during the learning, and the relevant ontology data tend to be eliminated. Four experiments are designed to test the serviceability of our disequilibrium multi-dividing algorithm from angles of ontology similarity measuring and ontology mapping construction.     

Evaluating social exclusion interventions in university-community partnerships

Most university-community partnerships (UCPs) involve elements of community-level social exclusion interventions. As such, they face substantial challenges in management and evaluation. This paper highlights the central challenges associated with evaluation of UCP and other social exclusion interventions at the community level, and suggests methods to overcome them. The main body of the paper presents a case study based on a four-year action research involving evaluation of a social exclusion intervention initiated and implemented by a UCP in Israel. The case study highlights the challenges faced by the evaluation team, the solutions provided, and the contribution of the evaluation to improvement and accountability.     

R-CMap—An open-source software for concept mapping

Planning and evaluating projects often involves input from many stakeholders. Fusing and organizing many different ideas, opinions, and interpretations into a coherent and acceptable plan or project evaluation is challenging. This is especially true when seeking contributions from a large number of participants, especially when not all can participate in group discussions, or when some prefer to contribute their perspectives anonymously. One of the major breakthroughs in the area of evaluation and program planning has been the use of graphical tools to represent the brainstorming process. This provides a quantitative framework for organizing ideas and general concepts into simple-to-interpret graphs. We developed a new, open-source concept mapping software called R-CMap, which is implemented in R. This software provides a graphical user interface to guide users through the analytical process of concept mapping. The R-CMap software allows users to generate a variety of plots, including cluster maps, point rating and cluster rating maps, as well as pattern matching and go-zone plots. Additionally, R-CMap is capable of generating detailed reports that contain useful statistical summaries of the data. The plots and reports can be embedded in Microsoft Office tools such as Word and PowerPoint, where users may manually adjust various plot and table features to achieve the best visual results in their presentations and official reports. The graphical user interface of R-CMap allows users to define cluster names, change the number of clusters, select rating variables for relevant plots, and importantly, select subsets of respondents by demographic criteria. The latter is particularly useful to project managers in order to identify different patterns of preferences by subpopulations. R-CMap is user-friendly, and does not require any programming experience. However, proficient R users can add to its functionality by directly accessing built-in functions in R and sharing new features with the concept mapping community.