Bayesian point null hypothesis testing via the posterior likelihood ratio

This paper gives an exposition of the use of the posterior likelihood ratio for testing point null hypotheses in a fully Bayesian framework. Connections between the frequentist P-value and the posterior distribution of the likelihood ratio are used to interpret and calibrate P-values in a Bayesian context, and examples are given to show the use of simple posterior simulation methods to provide Bayesian tests of common hypotheses.     

Inference in model-based cluster analysis

A new approach to cluster analysis has been introduced based on parsimonious geometric modelling of the within-group covariance matrices in a mixture of multivariate normal distributions, using hierarchical agglomeration and iterative relocation. It works well and is widely used via the MCLUST software available in S-PLUS and StatLib. However, it has several limitations: there is no assessment of the uncertainty about the classification, the partition can be suboptimal, parameter estimates are biased, the shape matrix has to be specified by the user, prior group probabilities are assumed to be equal, the method for choosing the number of groups is based on a crude approximation, and no formal way of choosing between the various possible models is included. Here, we propose a new approach which overcomes all these difficulties. It consists of exact Bayesian inference via Gibbs sampling, and the calculation of Bayes factors (for choosing the model and the number of groups) from the output using the Laplace–Metropolis estimator. It works well in several real and simulated examples.     

A bayesian test for a two-way contingency table using independence priors

One method of testing for independence in a two-way table is based on the Bayes factor, the ratio of the likelihoods under the independence hypothesis H and the alternative hypothesis H. The main difficulty in this approach is the specification of prior distributions on the composite hypotheses H and H. A new Bayesian test statistic is constructed by using a prior distribution on H that is concentrated about the “independence surface” H. Approximations are proposed which simplify the computation of the test statistic. The values of the Bayes factor are compared with values of statistics proposed by Gunel and Dickey (1974), Good and Crook (1987), and Spiegelhalter and Smith (1982) for a number of two-way tables. This investigation suggests a strong relationship between the new statistic and the p-value.     

An application of a minimax Bayes rule and shrinkage estimators to the portofolio selection problem under the Bayesian approach

This paper shows that a minimax Bayes rule and shrinkage estimators can be effectively applied to portfolio selection under the Bayesian approach. Specifically, it is shown that the portfolio selection problem can result in a statistical decision problem in some situations. Following that, we present a method for solving a problem involved in portfolio selection under the Bayesian approach.     

Linear statistics in change-point estimation and their asymptotic behaviour

ABSTRACT The limiting behaviour of Bayes procedures in the asymptotic setting of the change-point estimation problem is studied. It is shown that the distribution of the difference between the Bayes estimator and the parameter converges to the distribution of a fairly complicated random variable. A class of linear statistics is introduced, and the form of the Bayes estimator within this class is deduced. The asymptotic properties of this linear estimator are investigated in two different settings for the prior distribution.     

A structured variational learning approach for switching latent factor models

A data-driven approach for modeling volatility dynamics and co-movements in financial markets is introduced. Special emphasis is given to multivariate conditionally heteroscedastic factor models in which the volatilities of the latent factors depend on their past values, and the parameters are driven by regime switching in a latent state variable. We propose an innovative indirect estimation method based on the generalized EM algorithm principle combined with a structured variational approach that can handle models with large cross-sectional dimensions. Extensive Monte Carlo simulations and preliminary experiments with financial data show promising results.     

Bayesian estimation of P (Y<X) from Burr-type X model containing spurious observations

We consider the problem of estimating R=P(Y<X) when X and Y are independent Burr-type X random variables. We assume that the sample from each population contains one spurious observation. Bayes estimates are derived for exchangeable and identifiable cases. Monte Carlo simulation is carried out to compare the bias and the expected loss of R.     

Bayesian model selection for join point regression with application to age-adjusted cancer rates

Summary.  The method of Bayesian model selection for join point regression models is developed. Given a set of K +1 join point models M ₀,  M ₁, …,  M _K with 0, 1, …,  K join points respec-tively, the posterior distributions of the parameters and competing models M _k are computed by Markov chain Monte Carlo simulations. The Bayes information criterion BIC is used to select the model M _k with the smallest value of BIC as the best model. Another approach based on the Bayes factor selects the model M _k with the largest posterior probability as the best model when the prior distribution of M _k is discrete uniform. Both methods are applied to analyse the observed US cancer incidence rates for some selected cancer sites. The graphs of the join point models fitted to the data are produced by using the methods proposed and compared with the method of Kim and co-workers that is based on a series of permutation tests. The analyses show that the Bayes factor is sensitive to the prior specification of the variance σ ², and that the model which is selected by BIC fits the data as well as the model that is selected by the permutation test and has the advantage of producing the posterior distribution for the join points. The Bayesian join point model and model selection method that are presented here will be integrated in the National Cancer Institute's join point software ( http://www.srab.cancer.gov/joinpoint/ ) and will be available to the public.     

Approximating bayesian inference by weighted likelihood

The author proposes to use weighted likelihood to approximate Bayesian inference when no external or prior information is available. He proposes a weighted likelihood estimator that minimizes the empirical Bayes risk under relative entropy loss. He discusses connections among the weighted likelihood, empirical Bayes and James‐Stein estimators. Both simulated and real data sets are used for illustration purposes.     

A family of admissible minimax estimators of the mean of a multivariate,normal distribution

Let X has a p-dimensional normal distribution with mean vector θ and identity covariance matrix I. In a compound decision problem consisting of squared-error estimation of θ, Strawderman (1971) placed a Beta (α, 1) prior distribution on a normal class of priors to produce a family of Bayes minimax estimators. We propose an incomplete Gamma(α, β) prior distribution on the same normal class of priors to produce a larger family of Bayes minimax estimators. We present the results of a Monte Carlo study to demonstrate the reduced risk of our estimators in comparison with the Strawderman estimators when θ is away from the zero vector.