《桐城文学渊源考》补阙考误

刘声木《桐城文学渊源考》载录了以桐城派为中心的1206位作家的生平,为探寻桐城文派的渊源与流变提供了丰赡的资料。然而,书中所载录的文字阙漏较多,内容涉及作家的名、字、号、里贯、科考、仕宦、著述名称及卷数等方面,并且传记内容时有错讹。通过爬梳载籍,对26位作家的名、字加以考补,对传记中的错讹加以辨正,以补其阙,以正其讹。     

Empirical likelihood for nonlinear models with missing responses

In this paper, a nonlinear model with response variables missing at random is studied. In order to improve the coverage accuracy for model parameters, the empirical likelihood (EL) ratio method is considered. On the complete data, the EL statistic for the parameters and its approximation have a χ² asymptotic distribution. When the responses are reconstituted using a semi-parametric method, the empirical log-likelihood on the response variables associated with the imputed data is also asymptotically χ². The Wilks theorem for EL on the parameters, based on reconstituted data, is also satisfied. These results can be used to construct the confidence region for the model parameters and the response variables. It is shown via Monte Carlo simulations that the EL methods outperform the normal approximation-based method in terms of coverage probability for the unknown parameter, including on the reconstituted data. The advantages of the proposed method are exemplified on real data.     

Maximum likelihood estimation of bivariate circular hidden Markov models from incomplete data

In this paper, we propose a hidden Markov model for the analysis of the time series of bivariate circular observations, by assuming that the data are sampled from bivariate circular densities, whose parameters are driven by the evolution of a latent Markov chain. The model segments the data by accounting for redundancies due to correlations along time and across variables. A computationally feasible expectation maximization (EM) algorithm is provided for the maximum likelihood estimation of the model from incomplete data, by treating the missing values and the states of the latent chain as two different sources of incomplete information. Importance-sampling methods facilitate the computation of bootstrap standard errors of the estimates. The methodology is illustrated on a bivariate time series of wind and wave directions and compared with popular segmentation models for bivariate circular data, which ignore correlations across variables and/or along time.     

An extension of the placebo‐based pattern‐mixture model

Pattern‐mixture models provide a general and flexible framework for sensitivity analyses of nonignorable missing data in longitudinal studies. The placebo‐based pattern‐mixture model handles missing data in a transparent and clinically interpretable manner. We extend this model to include a sensitivity parameter that characterizes the gradual departure of the missing data mechanism from being missing at random toward being missing not at random under the standard placebo‐based pattern‐mixture model. We derive the treatment effect implied by the extended model. We propose to utilize the primary analysis based on a mixed‐effects model for repeated measures to draw inference about the treatment effect under the extended placebo‐based pattern‐mixture model. We use simulation studies to confirm the validity of the proposed method. We apply the proposed method to a clinical study of major depressive disorders. Copyright © 2013 John Wiley & Sons, Ltd.     

Joint modeling tumor burden and time to event data in oncology trials

The tumor burden (TB) process is postulated to be the primary mechanism through which most anticancer treatments provide benefit. In phase II oncology trials, the biologic effects of a therapeutic agent are often analyzed using conventional endpoints for best response, such as objective response rate and progression‐free survival, both of which causes loss of information. On the other hand, graphical methods including spider plot and waterfall plot lack any statistical inference when there is more than one treatment arm. Therefore, longitudinal analysis of TB data is well recognized as a better approach for treatment evaluation. However, longitudinal TB process suffers from informative missingness because of progression or death. We propose to analyze the treatment effect on tumor growth kinetics using a joint modeling framework accounting for the informative missing mechanism. Our approach is illustrated by multisetting simulation studies and an application to a nonsmall‐cell lung cancer data set. The proposed analyses can be performed in early‐phase clinical trials to better characterize treatment effect and thereby inform decision‐making. Copyright © 2014 John Wiley & Sons, Ltd.     

Evaluation of incomplete multiple diagnostic tests,with an application in the colon cancer family registry study

Accurate diagnosis of a molecularly defined subtype of cancer is often an important step toward its effective control and treatment. For the diagnosis of some subtypes of a cancer, a gold standard with perfect sensitivity and specificity may be unavailable. In those scenarios, tumor subtype status is commonly measured by multiple imperfect diagnostic markers. Additionally, in many such studies, some subjects are only measured by a subset of diagnostic tests and the missing probabilities may depend on the unknown disease status. In this paper, we present statistical methods based on the EM algorithm to evaluate incomplete multiple imperfect diagnostic tests under a missing at random assumption and one missing not at random scenario. We apply the proposed methods to a real data set from the National Cancer Institute (NCI) colon cancer family registry on diagnosing microsatellite instability for hereditary non-polyposis colorectal cancer to estimate diagnostic accuracy parameters (i.e. sensitivities and specificities), prevalence, and potential differential missing probabilities for 11 biomarker tests. Simulations are also conducted to evaluate the small-sample performance of our methods.     

Transformation of non positive semidefinite correlation matrices

In multivariate statistics, estimation of the covariance or correlation matrix is of crucial importance. Computational and other arguments often lead to the use of coordinate-dependent estimators, yielding matrices that are symmetric but not positive semidefinite. We briefly discuss existing methods, based on shrinking, for transforming such matrices into positive semidefinite matrices, A simple method based on eigenvalues is also considered. Taking into account the geometric structure of correlation matrices, a new method is proposed which uses techniques similar to those of multidimensional scaling.     

缺失偏态数据下线性回归模型的统计推断

研究缺失偏态数据下线性回归模型的参数估计问题,针对缺失偏态数据,为克服样本分布扭曲缺点和提高模型的回归系数、尺度参数和偏度参数的估计效果,提出了一种适合偏态数据下线性回归模型中缺失数据的修正回归插补方法.通过随机模拟和实例研究,并与均值插补、回归插补、随机回归插补方法比较,结果表明所提出的修正回归插补方法是有效可行的.     

Simplified Maximum Likelihood Inference Based on the Likelihood Decomposition for Missing Data

In this paper, we propose an estimation method when sample data are incomplete. We decompose the likelihood according to missing patterns and combine the estimators based on each likelihood weighting by the Fisher information ratio. This approach provides a simple way of estimating parameters, especially for non‐monotone missing data. Numerical examples are presented to illustrate this method.