Bayesian nonparametric modelling of the link function in the single-index model using a Bernstein–Dirichlet process prior

This paper proposes the use of the Bernstein–Dirichlet process prior for a new nonparametric approach to estimating the link function in the single-index model (SIM). The Bernstein–Dirichlet process prior has so far mainly been used for nonparametric density estimation. Here we modify this approach to allow for an approximation of the unknown link function. Instead of the usual Gaussian distribution, the error term is assumed to be asymmetric Laplace distributed which increases the flexibility and robustness of the SIM. To automatically identify truly active predictors, spike-and-slab priors are used for Bayesian variable selection. Posterior computations are performed via a Metropolis-Hastings-within-Gibbs sampler using a truncation-based algorithm for stick-breaking priors. We compare the efficiency of the proposed approach with well-established techniques in an extensive simulation study and illustrate its practical performance by an application to nonparametric modelling of the power consumption in a sewage treatment plant.     

Model selection in high-dimensional noisy data: a simulation study

In many practical applications, high-dimensional regression analyses have to take into account measurement error in the covariates. It is thus necessary to extend regularization methods, that can handle the situation where the number of covariates p largely exceed the sample size n, to the case in which covariates are also mismeasured. A variety of methods are available in this context, but many of them rely on knowledge about the measurement error and the structure of its covariance matrix. In this paper, we set the goal to compare some of these methods, focusing on situations relevant for practical applications. In particular, we will evaluate these methods in setups in which the measurement error distribution and dependence structure are not known and have to be estimated from data. Our focus is on variable selection, and the evaluation is based on extensive simulations.     

Learning from a lot: Empirical Bayes for high‐dimensional model‐based prediction

Empirical Bayes is a versatile approach to “learn from a lot” in two ways: first, from a large number of variables and, second, from a potentially large amount of prior information, for example, stored in public repositories. We review applications of a variety of empirical Bayes methods to several well‐known model‐based prediction methods, including penalized regression, linear discriminant analysis, and Bayesian models with sparse or dense priors. We discuss “formal” empirical Bayes methods that maximize the marginal likelihood but also more informal approaches based on other data summaries. We contrast empirical Bayes to cross‐validation and full Bayes and discuss hybrid approaches. To study the relation between the quality of an empirical Bayes estimator and p, the number of variables, we consider a simple empirical Bayes estimator in a linear model setting. We argue that empirical Bayes is particularly useful when the prior contains multiple parameters, which model a priori information on variables termed “co‐data”. In particular, we present two novel examples that allow for co‐data: first, a Bayesian spike‐and‐slab setting that facilitates inclusion of multiple co‐data sources and types and, second, a hybrid empirical Bayes–full Bayes ridge regression approach for estimation of the posterior predictive interval.     

Approximate composite marginal likelihood inference in spatial generalized linear mixed models

Non-Gaussian spatial responses are usually modeled using spatial generalized linear mixed model with spatial random effects. The likelihood function of this model cannot usually be given in a closed form, thus the maximum likelihood approach is very challenging. There are numerical ways to maximize the likelihood function, such as Monte Carlo Expectation Maximization and Quadrature Pairwise Expectation Maximization algorithms. They can be applied but may in such cases be computationally very slow or even prohibitive. Gauss–Hermite quadrature approximation only suitable for low-dimensional latent variables and its accuracy depends on the number of quadrature points. Here, we propose a new approximate pairwise maximum likelihood method to the inference of the spatial generalized linear mixed model. This approximate method is fast and deterministic, using no sampling-based strategies. The performance of the proposed method is illustrated through two simulation examples and practical aspects are investigated through a case study on a rainfall data set.     

Hard thresholding regression

In this paper, we propose the hard thresholding regression (HTR) for estimating high‐dimensional sparse linear regression models. HTR uses a two‐stage convex algorithm to approximate the ?₀‐penalized regression: The first stage calculates a coarse initial estimator, and the second stage identifies the oracle estimator by borrowing information from the first one. Theoretically, the HTR estimator achieves the strong oracle property over a wide range of regularization parameters. Numerical examples and a real data example lend further support to our proposed methodology.     

Generalized estimator of population mean by using conventional and non-conventional measures in the presence of measurement errors

In survey research, it is assumed that reported response by the individual is correct. However, given the issues of prestige bias, self-respect, respondent's reported data often produces estimated values which are highly deviated from the true values. This causes measurement error (ME) to be present in the sample estimates. In this article, the estimation of population mean in the presence of measurement error using information on a single auxiliary variable is studied. A generalized estimator of population mean is proposed. The class of estimators is obtained by using some conventional and non-conventional measures. Simulation and numerical study is also conducted to assess the performance of estimators in the presence and absence of measurement error.     

Instrumental variable based variable selection for generalized linear models with endogenous covariates

We study the variable selection problem for a class of generalized linear models with endogenous covariates. Based on the instrumental variable adjustment technology and the smooth-threshold estimating equation (SEE) method, we propose an instrumental variable based variable selection procedure. The proposed variable selection method can attenuate the effect of endogeneity in covariates, and is easy for application in practice. Some theoretical results are also derived such as the consistency of the proposed variable selection procedure and the convergence rate of the resulting estimator. Further, some simulation studies and a real data analysis are conducted to evaluate the performance of the proposed method, and simulation results show that the proposed method is workable.     

Fast and approximate exhaustive variable selection for generalised linear models with APES

We present APproximated Exhaustive Search (APES), which enables fast and approximated exhaustive variable selection in Generalised Linear Models (GLMs). While exhaustive variable selection remains as the gold standard in many model selection contexts, traditional exhaustive variable selection suffers from computational feasibility issues. More precisely, there is often a high cost associated with computing maximum likelihood estimates (MLE) for all subsets of GLMs. Efficient algorithms for exhaustive searches exist for linear models, most notably the leaps‐and‐bound algorithm and, more recently, the mixed integer optimisation (MIO) algorithm. The APES method learns from observational weights in a generalised linear regression super‐model and reformulates the GLM problem as a linear regression problem. In this way, APES can approximate a true exhaustive search in the original GLM space. Where exhaustive variable selection is not computationally feasible, we propose a best‐subset search, which also closely approximates a true exhaustive search. APES is made available in both as a standalone R package as well as part of the already existing mplot package.     

西部乡村—城镇转型多元评价指标体系的构建及应用

以乡村综合发展度、乡村—城镇变迁度、乡村—城镇协调度为测度标准,构建一套综合评价指标体系。以中国西部地区为研究对象,对2001—2010年十年间乡村—城镇转型发展态势进行分析和评价。研究结果表明:(1)从整体层面来看,西部地区乡村综合发展度不断提高,乡村—城镇变迁度不断加快,乡村—城镇协调度不断优化;(2)从省际层面来看,不同省区的乡村—城镇转型呈现出不同的发展面貌,具有较大的差距。