An Empirical Study of Statistical Properties of Variance Partition Coefficients for Multi-Level Logistic Regression Models

Partitioning the variance of a response by design levels is challenging for binomial and other discrete outcomes. Goldstein (2003 Goldstein , H. ( 2003 ). Multilevel Statistical Models. 3rd ed . London : Edward Arnold . [Google Scholar]) proposed four definitions for variance partitioning coefficients (VPC) under a two-level logistic regression model. In this study, we explicitly derived formulae for multi-level logistic regression model and subsequently studied the distributional properties of the calculated VPCs. Using simulations and a vegetation dataset, we demonstrated associations between different VPC definitions, the importance of methods for estimating VPCs (by comparing VPC obtained using Laplace and penalized quasilikehood methods), and bivariate dependence between VPCs calculated at different levels. Such an empirical study lends an immediate support to wider applications of VPC in scientific data analysis.     

Transformed Logit Confidence Intervals for Small Populations in Single Capture–Recapture Estimation

The good performance of logit confidence intervals for the odds ratio with small samples is well known. This is true unless the actual odds ratio is very large. In single capture–recapture estimation the odds ratio is equal to 1 because of the assumption of independence of the samples. Consequently, a transformation of the logit confidence intervals for the odds ratio is proposed in order to estimate the size of a closed population under single capture–recapture estimation. It is found that the transformed logit interval, after adding .5 to each observed count before computation, has actual coverage probabilities near to the nominal level even for small populations and even for capture probabilities near to 0 or 1, which is not guaranteed for the other capture–recapture confidence intervals proposed in statistical literature. Thus, given that the .5 transformed logit interval is very simple to compute and has a good performance, it is appropriate to be implemented by most users of the single capture–recapture method.     

Testing Equality of Mean Vectors in Two Sample Problem with Missing Data

Finding the influence of traffic accident on the road is helpful to analyze the characteristics of traffic flow, and take reasonable and effective control measures. Here, the detrended fluctuation analysis method is applied to investigate the complexity of time series in mixed traffic flow with a blockage induced by an accident. As a parameter to depict the long-term evolutionary behavior of the time series in traffic flow, the scaling exponent is analyzed. According to the scaling exponent, it is shown that the traffic flow time series can display long-range correlation characteristics, short-range correlation characteristics, and non-power-law relation in the long-range correlation characteristics, which is strongly dependent on the entering probability of vehicle, the ratio of slow vehicle and the blockage duration time.     

Dirichlet Processes in Nonlinear Mixed Effects Models

In this article, we use two efficient approaches to deal with the difficulty in computing the intractable integrals when implementing Gibbs sampling in the nonlinear mixed effects model (NLMM) based on Dirichlet processes (DP). In the first approach, we compute the Laplace's approximation to the integral for its high accuracy, low cost, and ease of implementation. The second approach uses the no-gaps algorithm of MacEachern and Müller (1998 MacEachern , S. , Müller , P. ( 1998 ). Estimating mixtures of Dirichlet process models . Journal of Computational and Graphical Statistics 7 : 223 – 238 .[Taylor & Francis Online], [Web of Science ®] , [Google Scholar]) to perform Gibbs sampling without evaluating the difficult integral. We apply both approaches to real problems and simulations. Results show that both approaches perform well in density estimation and prediction and are superior to the parametric analysis in that they can detect important model features, such as skewness, long tails, and multimodality, whereas the parametric analysis cannot.     

Testing Fractional Order of Long Memory Processes: A Monte Carlo Study

Testing the fractionally integrated order of seasonal and nonseasonal unit roots is quite important for the economic and financial time series modeling. In this article, the widely used Robinson's (1994 Robinson , P. M. ( 1994 ). Efficient tests of nonstationary hypotheses . J. Am. Stat. Assoc. 89 ( 428 ): 1420 – 1437 .[Taylor & Francis Online], [Web of Science ®] , [Google Scholar]) test is applied to various well-known long memory models. Via Monte Carlo experiments, we study and compare the performances of this test using several sample sizes.     

Composite Marginal Likelihoods to the Normal Bradley-Terry Model

Inference in generalized linear mixed models with crossed random effects is often made cumbersome by the high-dimensional intractable integrals involved in the marginal likelihood. This article presents two inferential approaches based on the marginal composite likelihood for the normal Bradley-Terry model. The two approaches are illustrated by a simulation study to evaluate their performance. Thereafter, the asymptotic variances of the estimated variance component are compared.     

A Note on the Likelihood Ratio Test for Equality of k Normal Populations

The authors derive the analytic expressions for the mean and variance of the log-likelihood ratio for testing equality of k (k ≥ 2) normal populations, and suggest a chi-square approximation and a gamma approximation to the exact null distribution. Numerical comparisons show that the two approximations and the original beta approximation of Neyman and Pearson (1931 Neyman , J. , Pearson , E. S. ( 1931 ). On the problem of k samples . In: Neyman , J. , Pearson , E. S. , eds. Joint Statistical Papers . Cambridge : Cambridge University Press , pp. 116 – 131 . [Google Scholar]) are all accurate, and the gamma approximation is the most accurate.     

Regenerative Markov Chain Monte Carlo for Any Distribution

While Markov chain Monte Carlo (MCMC) methods are frequently used for difficult calculations in a wide range of scientific disciplines, they suffer from a serious limitation: their samples are not independent and identically distributed. Consequently, estimates of expectations are biased if the initial value of the chain is not drawn from the target distribution. Regenerative simulation provides an elegant solution to this problem. In this article, we propose a simple regenerative MCMC algorithm to generate variates for any distribution.     

Bootstrapping the Hausman Test in Panel Data Models

In the article, it is shown that in panel data models the Hausman test (HT) statistic can be considerably refined using the bootstrap technique. Edgeworth expansion shows that the coverage of the bootstrapped HT is second-order correct.

The asymptotic versus the bootstrapped HT are compared also by Monte Carlo simulations. At the null hypothesis and a nominal size of 0.05, the bootstrapped HT reduces the coverage error of the asymptotic HT by 10–40% of nominal size; for nominal sizes less than or equal to 0.025, the coverage error reduction is between 30% and 80% of nominal size. For the nonnull alternatives, the power of the asymptotic HT fictitiously increases by over 70% of the correct power for nominal sizes less than or equal to 0.025; the bootstrapped HT reduces overrejection to less than one fourth of its value. The advantages of the bootstrapped HT increase with the number of explanatory variables.

Heteroscedasticity or serial correlation in the idiosyncratic part of the error does not hamper advantages of the bootstrapped version of HT, if a heteroscedasticity robust version of the HT and the wild bootstrap are used. But, the power penalty is not negligible if a heteroscedasticity robust approach is used in the homoscedastic panel data model.     

A note on estimation in bernoulli trials with dependence

Finite sample properties of estimators for the parameters of a dependent Bernoulli process are investigated using Monte Carlo techniques. A ratio estimator is proposed for the dependence parameter of the model and is compared to the approximate maximum likelihood estimator given by Klotz. It is shown that both estimators have a downward bias that is extreme in certain cases and that samples well in excess of 200 may be necessary before the asymptotic theory can be applied.