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Dirichlet process mixture models for unsupervised clustering of symptoms in Parkinson's disease
Authors:Nicole White  Helen Johnson  Peter Silburn  Kerrie Mengersen
Affiliation:1. Mathematical Sciences , Queensland University of Technology , Brisbane , Australia;2. St. Andrew's War Memorial Hospital and Medical Institute , Brisbane , Australia
Abstract:In this paper, the goal of identifying disease subgroups based on differences in observed symptom profile is considered. Commonly referred to as phenotype identification, solutions to this task often involve the application of unsupervised clustering techniques. In this paper, we investigate the application of a Dirichlet process mixture model for this task. This model is defined by the placement of the Dirichlet process on the unknown components of a mixture model, allowing for the expression of uncertainty about the partitioning of observed data into homogeneous subgroups. To exemplify this approach, an application to phenotype identification in Parkinson's disease is considered, with symptom profiles collected using the Unified Parkinson's Disease Rating Scale.
Keywords:clustering  Dirichlet process mixture  Parkinson's disease  UPDRS
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