Mixed Graphical Models with Missing Data and the Partial Imputation EM Algorithm |
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Authors: | Zhi Geng,Kang Wan,& Feng Tao |
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Affiliation: | Peking University |
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Abstract: | In this paper we discuss graphical models for mixed types of continuous and discrete variables with incomplete data. We use a set of hyperedges to represent an observed data pattern. A hyperedge is a set of variables observed for a group of individuals. In a mixed graph with two types of vertices and two types of edges, dots and circles represent discrete and continuous variables respectively. A normal graph represents a graphical model and a hypergraph represents an observed data pattern. In terms of the mixed graph, we discuss decomposition of mixed graphical models with incomplete data, and we present a partial imputation method which can be used in the EM algorithm and the Gibbs sampler to speed their convergence. For a given mixed graphical model and an observed data pattern, we try to decompose a large graph into several small ones so that the original likelihood can be factored into a product of likelihoods with distinct parameters for small graphs. For the case that a graph cannot be decomposed due to its observed data pattern, we can impute missing data partially so that the graph can be decomposed. |
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Keywords: | CG distribution decomposition EM algorithm graphical models missing data |
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