Sparse regression techniques in low-dimensional survival data settings |
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Authors: | Christine Porzelius Martin Schumacher Harald Binder |
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Affiliation: | (1) Freiburg Center for Data Analysis and Modeling, University of Freiburg, Eckerstr. 1, 79104 Freiburg, Germany;(2) Institute of Medical Biometry and Medical Informatics, University Medical Center Freiburg, Stefan-Meier-Str. 26, 79104 Freiburg, Germany |
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Abstract: | In high-dimensional data settings, sparse model fits are desired, which can be obtained through shrinkage or boosting techniques. We investigate classical shrinkage techniques such as the lasso, which is theoretically known to be biased, new techniques that address this problem, such as elastic net and SCAD, and boosting technique CoxBoost and extensions of it, which allow to incorporate additional structure. To examine, whether these methods, that are designed for or frequently used in high-dimensional survival data analysis, provide sensible results in low-dimensional data settings as well, we consider the well known GBSG breast cancer data. In detail, we study the bias, stability and sparseness of these model fitting techniques via comparison to the maximum likelihood estimate and resampling, and their prediction performance via prediction error curve estimates. |
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