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The VGAM package for negative binomial regression
Authors:Thomas W. Yee
Abstract:Negative binomial (NB) regression is the most common full‐likelihood method for analysing count data exhibiting overdispersion with respect to the Poisson distribution. Usually most practitioners are content to fit one of two NB variants, however other important variants exist. It is demonstrated here that the VGAM R package can fit them all under a common statistical framework founded upon a generalised linear and additive model approach. Additionally, other modifications such as zero‐altered (hurdle), zero‐truncated and zero‐inflated NB distributions are naturally handled. Rootograms are also available for graphically checking the goodness of fit. Two data sets and some recently added features of the VGAM package are used here for illustration.
Keywords:overdispersion     R     rootogram  vector generalised additive models  vector generalised linear models  zero alteration  zero inflation  zero truncation
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