The frisch-waugh theorem and generalized least squares

We discuss the standard linear regression model with nonspherical disturbances, where some regressors are annihilated by considering only the residuals from an auxiliary regression, and where, analogous to the Frisch-Waugh procedure, the original GLS procedure is applied to the transformed data. We call this procedure pseudo-GLS and give conditions for pseudo-GL5 to be equal to genuine GLS. We also show via examples that these conditions are often violated in empirical applications, and that the Frisch-Waugh Theorem still “works” with nonspherical disturbances if efficient estimation is applied to both the original and the transformed data.