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Perfect simulation for Reed-Frost epidemic models
Authors:Philip D O'Neill
Institution:(1) School of Mathematical Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, England
Abstract:The Reed-Frost epidemic model is a simple stochastic process with parameter q that describes the spread of an infectious disease among a closed population. Given data on the final outcome of an epidemic, it is possible to perform Bayesian inference for q using a simple Gibbs sampler algorithm. In this paper it is illustrated that by choosing latent variables appropriately, certain monotonicity properties hold which facilitate the use of a perfect simulation algorithm. The methods are applied to real data.
Keywords:epidemics  stochastic epidemic models  Reed-Frost epidemic model  perfect simulation  Markov chain Monte Carlo methods  Bayesian inference
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