| Abstract: | While conjugate Bayesian inference in decomposable Gaussian graphical models is largely solved, the non-decomposable case still poses difficulties concerned with the specification of suitable priors and the evaluation of normalizing constants. In this paper we derive the DY-conjugate prior ( Diaconis & Ylvisaker, 1979 ) for non-decomposable models and show that it can be regarded as a generalization to an arbitrary graph G of the hyper inverse Wishart distribution ( Dawid & Lauritzen, 1993 ). In particular, if G is an incomplete prime graph it constitutes a non-trivial generalization of the inverse Wishart distribution. Inference based on marginal likelihood requires the evaluation of a normalizing constant and we propose an importance sampling algorithm for its computation. Examples of structural learning involving non-decomposable models are given. In order to deal efficiently with the set of all positive definite matrices with non-decomposable zero-pattern we introduce the operation of triangular completion of an incomplete triangular matrix. Such a device turns out to be extremely useful both in the proof of theoretical results and in the implementation of the Monte Carlo procedure. |
